LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph4g0371	ATGGGTTGTATATGCTCGAAAGGGACATCTTCAAATGATTATGTTGCTGAGAACCTTGCCCAAGACAAAGATACAAAGGCAAATAGAACCTCTAAACTTTTGAGTACGGGAGAGAAGATCGCAATAGAGGCTGATGGTAGTGGTAATGATGCGACTGCACGGTTGATACCTAATCCATCTCGGAATGGAACTTCAGGGTCCACTCCTATTTCATCAGATGATGGGGATAAGAATGGAGAGACTACTGCGAAGCCTGCAAAACAACTGGTTTATATGACCTCAAGCATGGGAATTGGAAGTGCAGGGGAAGGACAACCTAGAATGACCAGGATAAGTAGTGTACCTAAATGGGAAAAGGGACCCCAATTTCTTTCTGGCTGGCCTTCATGGCTTACCGCAGTTGCAGGGGAAGCCATTAATGGTTGGGTACCTCGCAGAGCAGACTCATATGAGAAGCTGGAGAAGATTGGGCAAGGAACTTACAGCGTTGTTTATAGGGCCCGTGATCTTGAAACAAATAAAATTGTTGCATTGAAGAAGGTTCGATTTGCTAATATGGATCCTGAAAGTGTTCGATTTATGGCAAGAGAAATTATTGTACTGCGAAGGCTTGATCATCCAAATGTCATGAAGCTTGAAAGCATCATTACTTCAAGGGTCTCGGGTAGCCTGTATCTTGTTTTTGAATATATGGAACATGATCTTGCAGGGCTTTCAGCAACACCTGGCATCAAGTTCACTGAAGAGCAGATCAAATGTTATATGCAACAATTGCTCCGTGGTATTGAGCATTGCCACAGTCATGGTGTTCTGCACCGAGACATTAAGGGCTCAAATCTTCTGATTGACAAGAATGGCAATCTAAAGATTGGTGATTTTGGGCTAGCGACTTTATTTGAGCCTTCTAAGGGACAGGTGGAGCAGCTTCATAAAATCTTCAAACTCTGTGGATCACCTTCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCAACAATTTTCAAACCTCAACATCCCTACAAACGTGTTGTAGCTGAGACTTTTAAGGATTTTCCTCCATCGGCACTAAGCCTTTTGGAAATCCTTCTTGCTATAGAACCTGAGGATCGAGGAACTGCTTCTTTAGCACTTCAGAGTGAGTTCTTCACGACAAAGCCCCTTCCATGTGATCCTTCAACTTTGCCAAAGTACCCACCAAGTAAGGAGTTTGATGTCAAGTTTCGTCAAGAAGAAGCCAGAAGACGAAGAGTGGCAAGTAATAAAGAAAATGCAGAGGAATCAGTTAGCAAGGTTTCCAAAGAATCTAAGGCTGTTCCAGCACCTGATGCTAATGCTGAGTTGCGGGCATCAATTGAGAAGAGACAACGGCAGGACAACACTAAATGTGTCAGTGAGAAGTTCAATCCTGATGAGGATGGTGGTTCTGGCTTCCCTATCGAACCTTCGAGGACAAAAGCAGTCTTCTCTCATTCTGGCCAGTCAATGCATCCAACTGCATATGGATCTTCACGCAATATGAATCTGAACAAGGAAGAATCTGTTGCTGGCGCTGGCCATGCCAATAATTTAGGAAATCCTGCTGATTTGAGAAAACAGAGATCCTACATGCATAGGAATGCCGCCCGATTGTCAAGATTTTCTAATTCAGTTGCCAACGGAGGTGCTTTAAAGCTTGATATGAGTGGAGATGCTAGTGTGAATTCACAGTGGCCTGACGATGGCTTTGGCACTCAGTATGACCATCTTGGTGATGGTGAATCCAATCAATTGCTCAAGTCTCTACACAACAAGGACATCTACCCTTGTGCAAAGGAGCCTTCCAAGGTCCATGCTCCAAAAAATGGTCACATTTACTATTCTGGACCACTGGTTCGTGGAGGGGAAAATCTCGATGAAATGCTTAAGGAGCATGAAAGACAAATTCAACAAGCTGTCCGCAGGGCACGCTCAGATAAGGTCAAAATAAGTAAATGTGACAAGGACAATGGCCAAACCGAATCACTACTTCATGCGAGAAATTGTAAGTGA	2031	0.4367	MGCICSKGTSSNDYVAENLAQDKDTKANRTSKLLSTGEKIAIEADGSGNDATARLIPNPSRNGTSGSTPISSDDGDKNGETTAKPAKQLVYMTSSMGIGSAGEGQPRMTRISSVPKWEKGPQFLSGWPSWLTAVAGEAINGWVPRRADSYEKLEKIGQGTYSVVYRARDLETNKIVALKKVRFANMDPESVRFMAREIIVLRRLDHPNVMKLESIITSRVSGSLYLVFEYMEHDLAGLSATPGIKFTEEQIKCYMQQLLRGIEHCHSHGVLHRDIKGSNLLIDKNGNLKIGDFGLATLFEPSKGQVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRVVAETFKDFPPSALSLLEILLAIEPEDRGTASLALQSEFFTTKPLPCDPSTLPKYPPSKEFDVKFRQEEARRRRVASNKENAEESVSKVSKESKAVPAPDANAELRASIEKRQRQDNTKCVSEKFNPDEDGGSGFPIEPSRTKAVFSHSGQSMHPTAYGSSRNMNLNKEESVAGAGHANNLGNPADLRKQRSYMHRNAARLSRFSNSVANGGALKLDMSGDASVNSQWPDDGFGTQYDHLGDGESNQLLKSLHNKDIYPCAKEPSKVHAPKNGHIYYSGPLVRGGENLDEMLKEHERQIQQAVRRARSDKVKISKCDKDNGQTESLLHARNCK	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph4g0371	676	Gene3D	Phosphorylase Kinase; domain 1	145	237	-	-
	Enph4g0371	676	Pfam	Protein kinase domain	150	303	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph4g0371	676	SUPERFAMILY	Protein kinase-like (PK-like)	143	391	IPR011009	-
	Enph4g0371	676	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	270	282	IPR008271	GO:0004672\|GO:0006468
	Enph4g0371	676	MobiDBLite	consensus disorder prediction	448	469	-	-
	Enph4g0371	676	MobiDBLite	consensus disorder prediction	415	479	-	-
	Enph4g0371	676	MobiDBLite	consensus disorder prediction	42	85	-	-
	Enph4g0371	676	PANTHER	CELL DIVISION PROTEIN KINASE	302	389	-	-
	Enph4g0371	676	SMART	serkin_6	150	383	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Enph4g0371	676	Coils	Coil	408	428	-	-
	Enph4g0371	676	MobiDBLite	consensus disorder prediction	415	433	-	-
	Enph4g0371	676	ProSitePatterns	Protein kinases ATP-binding region signature.	156	179	IPR017441	GO:0005524
	Enph4g0371	676	MobiDBLite	consensus disorder prediction	53	76	-	-
	Enph4g0371	676	Coils	Coil	628	655	-	-
	Enph4g0371	676	FunFam	probable serine/threonine-protein kinase At1g54610	137	232	-	-
	Enph4g0371	676	Gene3D	Transferase(Phosphotransferase) domain 1	238	303	-	-
	Enph4g0371	676	Gene3D	Transferase(Phosphotransferase) domain 1	304	423	-	-
	Enph4g0371	676	ProSiteProfiles	Protein kinase domain profile.	150	383	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph4g0371	Enph-Chr4	14686572	14694149	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph4g0371	142	426	Core Cell Cycle Gene Families	AT5G10270	41.026	2.76e-80	262

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CRK7-CDK9	Enph4g0371		Pkinase	7e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph4g0371	-		-	qsa:O6P43_031464	865.914