Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0353 ATGGGTCGAATGCACAGTCGGGGTTTGTTTTCTTATCTTGTTTACAGTTTATCAGACTTTGTTGAAGAGAACATCTGTAAGTTTGCCAAGAAGGGATTAACACCATCCCAAATTGGTGTTATTCTCCGTGACTCTCACGGTATTGCTCAGGTCAAGAGTGTAACTGGCAACAAGATCTTGCGTATTCTGAAGGCTCATGGTCTTGCTCCTGAAATACCAGAGGACCTCTACCACCTGATCAAGAAGGCTGTTTCAATTCGAAAGCATTTGGAAAGGAATAGGAAGGACAAAGATTCCAAGTTTAGGTTAATTTTGGTAGAGAGCAGGATCCATCGCCTTGCTCGTTACTATAAGAAAACAAAGAAGCTTCCTCCTGTTTGGAAATATGAGTCAACAACTGCCAGCACCCTCGTTGCTTAA 420 0.4238 MGRMHSRGLFSYLVYSLSDFVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0353 139 SMART Ribosomal_S13_N_2 1 48 IPR012606 GO:0003735|GO:0005840|GO:0006412
Enph4g0353 139 PANTHER RIBOSOMAL PROTEIN S15P/S13E 18 139 IPR023029 -
Enph4g0353 139 SUPERFAMILY S15/NS1 RNA-binding domain 54 130 IPR009068 -
Enph4g0353 139 Gene3D - 23 70 - -
Enph4g0353 139 FunFam 40S ribosomal protein S13 23 70 - -
Enph4g0353 139 Gene3D - 71 139 - -
Enph4g0353 139 FunFam 40S ribosomal protein S13 71 139 - -
Enph4g0353 139 Pfam Ribosomal S13/S15 N-terminal domain 18 48 IPR012606 GO:0003735|GO:0005840|GO:0006412
Enph4g0353 139 CDD Ribosomal_S15p_S13e 58 131 IPR000589 GO:0003735|GO:0005840|GO:0006412
Enph4g0353 139 ProSitePatterns Ribosomal protein S15 signature. 86 116 IPR000589 GO:0003735|GO:0005840|GO:0006412
Enph4g0353 139 Pfam Ribosomal protein S15 62 133 IPR000589 GO:0003735|GO:0005840|GO:0006412
Enph4g0353 139 SMART Ribosomal_S15_2 58 137 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0353 Enph-Chr4 14073893 14076633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0353 1 139 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 83.444 3.26e-84 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0353 K02953 - csv:101212336 243.432