Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0178 ATGGAGAAAAATAAAATTAGGGTTGATGATGATATCAGTCCTAGCAACAATGACTCTACTTCATATGCTGAAGAGTCACGTTTTCAGACTGAACACACTGTTTTTGATGCATCACACTATTTGAAGGTTCTGAAAGAAAAATTTGAGCAACAAAGGGAAAAATATGATACATTTTTATCAATCATGAAATGCTTCAAAGATAAAAGGATTGACATATCAGATTTCATCACGAGGTTGAAGGAATTACTCAAAGGTCACGACATTCTGATTCTGGGATTAAACAACTTCTTGACCTCCAAGTACCGAATCCCTCTTTCTTTTGAATGTCTTGATCCGCATGATGATGACAAACCTCATGCTAAAGTGCAGAAGAAAAGGAGTCGTCATCATCTTGAGAATCCGAGATTCGCTAATCAAAATTGGACCGAAAAAGATAGAGACGTCAAGAAGAAGTCGTCGGAAACTTCTGGAACCGGAGATGAACAACATCGTCTCAAGCAAAATGAGAGAGATCATGATGTTGATGATAAGATCACTAATGAACATCACGATCATGAAGAGATCAAGCTGTCTGAGATTTCTAGATCTGAAGATGAACATCATCGTCACAATCAGGACGAGAGAGATCATGAAGCTGATGATAATACCGGTAATAACTTTAGCCTGAAACTGCATTGCAATCATAAAGATTATTCAACGCCTCGTGAACTCGATCTAAGCAAATGTGAGCGTTCTGGTAGCTATGTCTGTCTGTTTGGAGATGACGAAATTCTGATTCCTAGCGGGAGATCTAGGCTTCATGCTTCAGTATTGAATGATTATTGGGTACAGAATCCACAATGCAAGGATGACTCTGATTCCCAACCTAACCTCAATACCAACGATTATCAACAAGCACTGTTTGAATGTGAAGATGATCAATTTGAGGTAGATGTGTTTATAGCATCTGCGCATTCAGCCTTAAGACGTGCTGATCAAGTGTTGAGTGACATACAGAACAAGAAAATCAAAACAGAGACTCCATTTCATGTGGAAGAACACTTCAGTTGCCTACAGTTAAGATTTATTGAGTGTTTGTATGGTGAATATAATCATGAATTTCTAGAGTTAGTTCGCGATAATCCAAGCAAAGCTTTACCTGTGATTATAAAGCGTCTCAAACAGAAGCATAAGGAGTTTCTTGAGCGTCGTTTGCAATTCAAGAAGTTTTGGTCTCAAGCTTATGCTGAAAATCACGCGAAATCACTTGATCTCAAGATATAG 1263 0.3816 MEKNKIRVDDDISPSNNDSTSYAEESRFQTEHTVFDASHYLKVLKEKFEQQREKYDTFLSIMKCFKDKRIDISDFITRLKELLKGHDILILGLNNFLTSKYRIPLSFECLDPHDDDKPHAKVQKKRSRHHLENPRFANQNWTEKDRDVKKKSSETSGTGDEQHRLKQNERDHDVDDKITNEHHDHEEIKLSEISRSEDEHHRHNQDERDHEADDNTGNNFSLKLHCNHKDYSTPRELDLSKCERSGSYVCLFGDDEILIPSGRSRLHASVLNDYWVQNPQCKDDSDSQPNLNTNDYQQALFECEDDQFEVDVFIASAHSALRRADQVLSDIQNKKIKTETPFHVEEHFSCLQLRFIECLYGEYNHEFLELVRDNPSKALPVIIKRLKQKHKEFLERRLQFKKFWSQAYAENHAKSLDLKI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0178 420 SMART hdac_interact2seq4b 241 341 IPR013194 -
Enph4g0178 420 Gene3D Paired amphipathic helix 36 97 IPR036600 GO:0006355
Enph4g0178 420 ProSiteProfiles PAH domain profile. 30 100 IPR003822 GO:0006355
Enph4g0178 420 Pfam Sin3 family co-repressor 246 335 IPR013194 -
Enph4g0178 420 MobiDBLite consensus disorder prediction 139 216 - -
Enph4g0178 420 SUPERFAMILY PAH2 domain 28 98 IPR036600 GO:0006355
Enph4g0178 420 MobiDBLite consensus disorder prediction 1 23 - -
Enph4g0178 420 PANTHER SIN3B-RELATED 33 417 IPR039774 GO:0003714
Enph4g0178 420 FunFam Paired amphipathic helix protein Sin3 36 98 - -
Enph4g0178 420 Pfam Paired amphipathic helix repeat 53 97 IPR003822 GO:0006355
Enph4g0178 420 MobiDBLite consensus disorder prediction 112 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0178 Enph-Chr4 4008360 4010125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0178 33 105 WRKY Transcription Factor Family AT4G12020 49.315 1.79e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Enph4g0178 Sin3_corepress 5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0178 K11644 - cave:132181355 169.474