LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph4g0174	ATGCATGTACTCATCGAGCGAACCCTTGTAAAGGTTGTGAATGACAAGATTCATGTTCACGATGTTTTACAAGAGATAGGAAAGGAAATTAGTCCTAATAAGCCAAAGCTCAAATATATCCATGATGTATTTTTAAGTTTTAGAGGGGAAGATACACGGAAAGCATTTGCTACTCATCTTTGTACTGCTCTAAAACAATCAGGTATTAAGGTCTTCATGGATGAAGAAAAGATTGAAAGGGGAGAAAATATTTCATCTTCTCTACTACAAGCTATTGAAAATTCTCGAATTTCAATTGTCATATTCTCAAAAAATTACGCAGGCTCTAGTTGGTGCTTGCAAGAATTAGAGAAAATCATGGAATGTTACAGAACAACTTATCAAGAGGTTTTCCCTATATTCTATGATGTGCAACCATCTGAAGTTCGTAAACAACAGAATGCCTTTGGAAAAGCATGGGAAAGGCTTACAGCGAGACCCTCAACTAGCAAAGGCAAGCAATTGACAATCAATTCAAAGAGAATTCTCACTGATGCTGCCAAATTATCTGGTTGGGATATGCAAAATTATAGAACTGAAACTGAGTTGATTGACGAGATTGCTGAAATTATCATGAGGAAGTTAGGTGACAACAAATGCTTGTTTGTTGCTCACCATCCAGTGGGATTGAAGTCTCGTTTGCAAGATATTGTTGAATTGCTAAATAGCAAATCAAATGAGGTTCTCATAGCAGGAATTTGGGGGATGGGGGGGATTGGTAAGACAACAATTGCCAAAGCCATTTACAATGAAGTTGATCAATGTTTTGAAGGAAAGAGTTTCCTTGCAAATGTTAGAAAAGTTTGGAAGCAAGATAATGGTCAAGTTTATCTACAAGAACAACTTCTTTCAGGGGTCTTAAAAACAAGAAGGATGGCATTACCAAATGTAGAGATGGGGAAAACTCTAGTCAAGGAAATGCTCTCTAAGAAAAGAGTGCTCGTTGCACTTGACGATGTGAACAATGAAAATCAACTCAAAGCATTATGTGGAAGTCGGGAATGGTTTGGTGAAGGTAGTAGGATAATCATCACAACTAGAGATGAACGTTTACTGAAGATCCTTAGAGTTGATCATGTATACAATGTGAAAGAAATGGATGATGATGAAGGTCTTGAGCTTTTTAGTTGGCATGCGTTTAAGCAAGAGTTACCTGAACGAGATTTCATTGAACTTTCAAGAAGAGTAGTTTCTTACTCTGGAGGATTGCCGCTAGCTCTTGAAATCCTTGGCTCCTATTTGTTTGATAGAGAAATGCTTATCTGGGAAAGTGTTTTGGAGAAACTACAACGAATTCCAAATGATCAAATACATGAAAAGCTAAAGATAAGTTATGATGGTTTGAGTGATCATACAGAGAAAGATGTATTCCTTGACATATGTGTTTTTTTTGCTGGAAAGGACAGACATTATGCTACACAAATATTGAATGGTTGTGGATTTCATGCAGACATTGGAATTGATCGTCTGATAGAGTTGAGCCTAGTAAAAGTTGACAACAAAAACAAGCTTGAAATCCATGACTTATTGCGTGACATGGGAAGAGAAATCATTCGTGAGCAGTCACCGGAGGAACCAGAGAAGCGTACTAGATTATGGCTTTATGATGAAGTGCTGGATGTGTTGAGAAATAGCATTGGAACAATAGCTATCAAGGGACTTGCTTTAGAGATGTCGAGGAACAGTTCATTATCCTTTAGTACCAAAGCATTTAAGAAGATGAAGAGGCTTCGTTTGCTACAACTTGATCATGTACAACTTGCTGGAGATTATGATTATCTATCAATAGAACTGAGATGGCTTCGCTGGCATGGATTTCCCTTAGAAAACATGCCAATGAACTTTTGTCTACACAAGATAGTGGCCATTGACTTAAAGTGGAGTAATCTCACAAAAGTATGGGAGAAAAGCCAGTTGCTGGAGTGGCTGAAAATTCTCAACCTAAGTCATTCTCACTACTTGAGAGAAACACCTGAGTTTTCAAAGTTACCGTATCTTGAAAAGTTAATACTCAAAGATTGTTCAAGTTTGTCTATCATCCACCCTTCCATTGGCGATCTTAAATATATTATTTTGTTAAATTTAAAGGACTGCAAAAGTCTCAAACACCTGCCAAGAAGTGTATATAACTTGAAATCTTTGAAGGAATTTATTCTTTCTGGTTGTTCAAAGATTGAAAAGCTAGAAGAAGACATTGAGCGAATGGAAGCTTTGACAACTTTGGTGGCAAACCAAACTGCTATTGCACAAGTCCCCATCTCATTAGTGAGATTGAAAAGCATTAAGCATGTATCTCTGTGTGGCTATGAAGGATCGCCGCGTGATGTATTTCCATCTCTTGTTTTGTCTTGGATGTCACCAACACATCATTCTAAGTCCTTGTTCCAATCATTTCGAATCATGCCATCTATAATCAAGAGTCTATCACATCCTTTATTTTCCAGAAGCTATGGAATAGTTGAAGGAAAAACAAGCAAATCTCAACCTTCATGTCAAAAGACTCCAGCATTGATTGAATTTCATGAGCAAGTTCACATTGAAAGGTCAGAAACATTTATGAGTTCTCTGACTATTCATGTAGGCGGGTTCAACAAAGTTGTTGATACATTGTTAAAGAGTATTTCACAGGGATGGAGTGATGGAGGGCTTGGCTATTCTCTTCCTAAAGACAATTATCCTGATTGGCTTCTTTTTGAAAATGAAGGATCTTCGGTTTCATTTAATGTTCCTCAAGTTATTGGTCATTGCTTAAAAGGAATGGTCCTCTACATTATCTATTCATCTCTTCAAGATAGCATGGCATCTATTTATCCCGTTGGTGTTATAACAAAGAATTTCACAAAAGCTACGATAGATTTCTACAAGCGAGATGCTGCATCAACTTCTGATGAAGAGTGGCAAAACATAATCTCCAATTTGGAGCCAGGAAATGATGTGGAAGTGGAAGTTAAGTTTGCTCATAAATATATTGTGAAGAAGACTGCAATTTATCTTGTATATGTTGAAGAAACCAACAAGCTGAGCATCAGTGAATAA	3075	0.3714	MHVLIERTLVKVVNDKIHVHDVLQEIGKEISPNKPKLKYIHDVFLSFRGEDTRKAFATHLCTALKQSGIKVFMDEEKIERGENISSSLLQAIENSRISIVIFSKNYAGSSWCLQELEKIMECYRTTYQEVFPIFYDVQPSEVRKQQNAFGKAWERLTARPSTSKGKQLTINSKRILTDAAKLSGWDMQNYRTETELIDEIAEIIMRKLGDNKCLFVAHHPVGLKSRLQDIVELLNSKSNEVLIAGIWGMGGIGKTTIAKAIYNEVDQCFEGKSFLANVRKVWKQDNGQVYLQEQLLSGVLKTRRMALPNVEMGKTLVKEMLSKKRVLVALDDVNNENQLKALCGSREWFGEGSRIIITTRDERLLKILRVDHVYNVKEMDDDEGLELFSWHAFKQELPERDFIELSRRVVSYSGGLPLALEILGSYLFDREMLIWESVLEKLQRIPNDQIHEKLKISYDGLSDHTEKDVFLDICVFFAGKDRHYATQILNGCGFHADIGIDRLIELSLVKVDNKNKLEIHDLLRDMGREIIREQSPEEPEKRTRLWLYDEVLDVLRNSIGTIAIKGLALEMSRNSSLSFSTKAFKKMKRLRLLQLDHVQLAGDYDYLSIELRWLRWHGFPLENMPMNFCLHKIVAIDLKWSNLTKVWEKSQLLEWLKILNLSHSHYLRETPEFSKLPYLEKLILKDCSSLSIIHPSIGDLKYIILLNLKDCKSLKHLPRSVYNLKSLKEFILSGCSKIEKLEEDIERMEALTTLVANQTAIAQVPISLVRLKSIKHVSLCGYEGSPRDVFPSLVLSWMSPTHHSKSLFQSFRIMPSIIKSLSHPLFSRSYGIVEGKTSKSQPSCQKTPALIEFHEQVHIERSETFMSSLTIHVGGFNKVVDTLLKSISQGWSDGGLGYSLPKDNYPDWLLFENEGSSVSFNVPQVIGHCLKGMVLYIIYSSLQDSMASIYPVGVITKNFTKATIDFYKRDAASTSDEEWQNIISNLEPGNDVEVEVKFAHKYIVKKTAIYLVYVEETNKLSISE	1024

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph4g0174	1024	Gene3D	Ribonuclease Inhibitor	541	812	IPR032675	-
	Enph4g0174	1024	ProSiteProfiles	TIR domain profile.	39	208	IPR000157	GO:0007165
	Enph4g0174	1024	Pfam	NB-ARC domain	229	448	IPR002182	GO:0043531
	Enph4g0174	1024	SMART	till_3	40	182	IPR000157	GO:0007165
	Enph4g0174	1024	SUPERFAMILY	"Winged helix" DNA-binding domain	449	555	IPR036390	-
	Enph4g0174	1024	FunFam	Disease resistance protein (TIR-NBS-LRR class)	38	210	-	-
	Enph4g0174	1024	SUPERFAMILY	Toll/Interleukin receptor TIR domain	36	157	IPR035897	-
	Enph4g0174	1024	Gene3D	-	39	213	IPR035897	-
	Enph4g0174	1024	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	205	473	IPR027417	-
	Enph4g0174	1024	SUPERFAMILY	L domain-like	534	786	-	-
	Enph4g0174	1024	Gene3D	-	215	373	IPR027417	-
	Enph4g0174	1024	Gene3D	-	378	462	IPR042197	-
	Enph4g0174	1024	Pfam	TIR domain	41	209	IPR000157	GO:0007165
	Enph4g0174	1024	Coils	Coil	738	758	-	-
	Enph4g0174	1024	PRINTS	Disease resistance protein signature	722	738	-	-
	Enph4g0174	1024	PRINTS	Disease resistance protein signature	243	258	-	-
	Enph4g0174	1024	PRINTS	Disease resistance protein signature	413	427	-	-
	Enph4g0174	1024	PRINTS	Disease resistance protein signature	320	334	-	-
	Enph4g0174	1024	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	41	767	IPR044974	GO:0006952

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph4g0174	Enph-Chr4	3705571	3711207	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph4g0174	41	771	WRKY Transcription Factor Family	AT4G12020	30.481	1.18e-82	293

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph4g0174	-		-	pcin:129288830	1603.19