Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph4g0121 ATGAGTTTTAGACAAAGAAAGGTGCATGAAATTCTTTACCAGTGTGCAAATTTTGCTGGTTTTTGGTGTCTTTGGTCTAGGATATGTGTTAAGAATCTGCCAAAATATGTTGCAGAAGATCGACTACGGGAATTATTTTCACAGAGGGGAGAAATAACAGATGTAAAGCTTATGCGTACCAAAGATGGCAAGAGTCGGCAATTTGGTTTTATTGGGTTTCATACTGAGGATGAAGCTAATGAAGCAATAAGATATTTCAATAGATCCTACCTTGACACCTGTAGAATCACTTGTGAGGTGGCTCGAAAAGTTGGTGATCCAAATATTCCTCGTCCATGGAGTCGATATTCATTGAAGAAAGAGGAAAAAGTGATCCAAGGTGGGAAGAAACATGCTGAAAATAAAAGTGTTGCTAAGGCACTAAGAATCGGAGAGAATTTGGAGAGCTCTGACATTAATGATCCACAGCTGCAAGAATTTCTTCAGGTTATGCAGCCTCGATCTAAGTCAAAATTGTGGGCAAATGATACATTAGCTGTGTTGGATAATGTTAGTGAGAAGCAAAAAAGAGCTGAGAACAAGGGCAAGGATGTTTCAGCTCCTGTGCATGCTGAGTTACTTCAATGTAGCTCATCAGATGATGGGTCCTCAGATACAGATAGTCATGAATCCAGTAAACCAAATAATCTTGTCCATGATGATGCCATTTCAGATATGGAATATTTCAAGAGTCGGGTGACAAAGAAGTGGTCTGATTCTGAAGACAGTGGTGATGATGAAGATAACAATGCTTCTGTGAGCAGTGATGATGACGATGACAACAAAGACAATGATAGTCATGGTGATGAAGGTGAAGATAATTGTGATGATAAATCTTTGAAAGGAACTGGAAGAGATGGTGATCGAAACTTAGACTCATCAGGCCAAGAAGATATCTGTAGTGAGGATAATGACCATGAAATGGCTGAAGCAAGAGGCCCTTCGAATACTTCTGGTGATAAAGTACCTGAGCAAGGGTCATATCTGAAAGATGAGAAAGGAGCTCTTGAGTCTTGTCGACTGTTTGTCCGTAATCTGCCATATACAGCCACTGAGGAAGAACTAGAAGAGCACTTCAGCAAGCTTGGCAGTGTCTCACAGGTTCATCTAGTTGTTGATAAAAATACAGAAAGATCCAAAGGGATAGCATATATTGTTTACACACTTCCAGAATTTGCAGCCAGGGCATTACAAGAGTTAGACAATTCAATCTTTCAAGGAAGATTGTTGCATGTTTTGCCTGCCATTCAAAGACCTTCAGACAGCAGGGAGAACAATTCATCCATGGAGCAAAGCTCCAAAACTTTTAAGCAGAAAAGAGATGAAGAGAGGAAAGCAGCTGAAGCTAGTGGAGATACCAGAGCATGGAATAGTCTGTTCATGCGCCCTGACACTGTTGTTGAAAACATTGCTCGCAAACATGGTGTAAGTAAAAGTGATTTACTTGACCAAGAAGCTGATGACCTTGCTGTGCGTATTGCTTTGGGTGAAACTCAAGTGATTGCAGAGACAAAAAAGGCCCTTAAAAATGCTGGAGTGAATGTGGAGTCGTTAGAGGAATTTGCCAATGGCAAAAAAGTTGGTGTGAAGAGAAGCAGCCATGTCCTTTTAGTGAAGAACTTGCCATATGGTTCCTCAGAAAATGATCTAACGAAGATGTTTGGGAAATTTGGTAGATTGGACAAAATAATTCTGCCACCAACAAAGACACTGGCATTGGTTGTCTACCTTGAACCAGCTCGAGCTCGAGCAGCTTTTAGAGGTTTAGCTTACAAGCGTTTCAAAGATGCTCCATTGTACTTGGAATGGGCTCCTTCCAACGTTCTTACCCAAAGTTTAACATTGGAGAATAATGAAAAGAGTGGTGCAATTGGTGAAAATGAGGCCAAACGGCTGATATTGGAGCAACATCTGGAAGGAGTATCAGATGTGGACATTGATCAGGACAGAGTTGAGGCTCGGTCTCTGTTTGTCAAGAACCTCAACTTTAAGACATCTGATGAGAGTTTGAAGAATCATTTTATTGAATGCTTGAAGGAAGGAAAAATTTTGAGTGTCAAGGTGAAGAAGCATTTGAAAAATGGAAAACAGGTTTCTACGGGGTTTGGATTCATCGAGTTTGATTCTGTTGAGACTGCTACAAATGTTTGCAGAGATTTACAGGGGACTGTTTTGGATGGCCATGCGCTTATTTTACAAGTTTGTCATGCCAAGGACAGACAAGTACCAAAAACAATTGAGAAGGACAAAAGCTCAACAAAACTGCTTGTGAGAAATGTAGCTTTTGAGGCGACAGAGAAGGAATTGAGACAATTGTTTAGCCCATTTGGTCAGATTAAGAGCTTAAGACTCCCTATGAAGTTTGGAAGTCATAGAGGCTTTGCTTTTGTGGAATATGTTACACAACAAGAGGCACAAAATGCACTCAAAGCTCTTTCAAGCACCCACTTGTACGGGAGGCATCTGGTGTTAGAGAGAGCAAAGGAGGGTGAGAGCTTGGAAGAACTACGGGCTCGAACGGCTGCACAATTTAGTGACGAGCAAAACGGATTTCAAAATCTTACTAAGTTTTCCAAGAAAAGGAAGCACTCGGCCATCTTGGATGAAGGAACGATGAAGTTTGCGAGAATTACTGATTAG 2679 0.4091 MSFRQRKVHEILYQCANFAGFWCLWSRICVKNLPKYVAEDRLRELFSQRGEITDVKLMRTKDGKSRQFGFIGFHTEDEANEAIRYFNRSYLDTCRITCEVARKVGDPNIPRPWSRYSLKKEEKVIQGGKKHAENKSVAKALRIGENLESSDINDPQLQEFLQVMQPRSKSKLWANDTLAVLDNVSEKQKRAENKGKDVSAPVHAELLQCSSSDDGSSDTDSHESSKPNNLVHDDAISDMEYFKSRVTKKWSDSEDSGDDEDNNASVSSDDDDDNKDNDSHGDEGEDNCDDKSLKGTGRDGDRNLDSSGQEDICSEDNDHEMAEARGPSNTSGDKVPEQGSYLKDEKGALESCRLFVRNLPYTATEEELEEHFSKLGSVSQVHLVVDKNTERSKGIAYIVYTLPEFAARALQELDNSIFQGRLLHVLPAIQRPSDSRENNSSMEQSSKTFKQKRDEERKAAEASGDTRAWNSLFMRPDTVVENIARKHGVSKSDLLDQEADDLAVRIALGETQVIAETKKALKNAGVNVESLEEFANGKKVGVKRSSHVLLVKNLPYGSSENDLTKMFGKFGRLDKIILPPTKTLALVVYLEPARARAAFRGLAYKRFKDAPLYLEWAPSNVLTQSLTLENNEKSGAIGENEAKRLILEQHLEGVSDVDIDQDRVEARSLFVKNLNFKTSDESLKNHFIECLKEGKILSVKVKKHLKNGKQVSTGFGFIEFDSVETATNVCRDLQGTVLDGHALILQVCHAKDRQVPKTIEKDKSSTKLLVRNVAFEATEKELRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALKALSSTHLYGRHLVLERAKEGESLEELRARTAAQFSDEQNGFQNLTKFSKKRKHSAILDEGTMKFARITD 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph4g0121 892 MobiDBLite consensus disorder prediction 447 463 - -
Enph4g0121 892 SUPERFAMILY RNA-binding domain, RBD 654 753 IPR035979 GO:0003676
Enph4g0121 892 Gene3D - 539 643 IPR012677 -
Enph4g0121 892 Gene3D - 757 865 IPR012677 -
Enph4g0121 892 FunFam RNA-binding motif protein 19 25 124 - -
Enph4g0121 892 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 352 430 IPR000504 GO:0003723
Enph4g0121 892 SUPERFAMILY RNA-binding domain, RBD 27 111 IPR035979 GO:0003676
Enph4g0121 892 SMART rrm1_1 548 615 IPR000504 GO:0003723
Enph4g0121 892 SMART rrm1_1 668 746 IPR000504 GO:0003723
Enph4g0121 892 SMART rrm1_1 767 838 IPR000504 GO:0003723
Enph4g0121 892 SMART rrm1_1 353 426 IPR000504 GO:0003723
Enph4g0121 892 SMART rrm1_1 27 99 IPR000504 GO:0003723
Enph4g0121 892 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 547 619 IPR000504 GO:0003723
Enph4g0121 892 MobiDBLite consensus disorder prediction 432 446 - -
Enph4g0121 892 SUPERFAMILY RNA-binding domain, RBD 755 845 IPR035979 GO:0003676
Enph4g0121 892 Gene3D - 664 756 IPR012677 -
Enph4g0121 892 SMART rrm2_1 767 838 IPR003954 GO:0003676
Enph4g0121 892 SMART rrm2_1 668 746 IPR003954 GO:0003676
Enph4g0121 892 SMART rrm2_1 353 426 IPR003954 GO:0003676
Enph4g0121 892 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 766 842 IPR000504 GO:0003723
Enph4g0121 892 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 667 750 IPR000504 GO:0003723
Enph4g0121 892 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 26 103 IPR000504 GO:0003723
Enph4g0121 892 MobiDBLite consensus disorder prediction 209 313 - -
Enph4g0121 892 FunFam Multiple RNA-binding domain-containing protein 1 538 640 - -
Enph4g0121 892 Gene3D - 324 466 IPR012677 -
Enph4g0121 892 Gene3D - 25 138 IPR012677 -
Enph4g0121 892 FunFam Nucleotide/nucleic acid binding protein 663 757 - -
Enph4g0121 892 CDD RRM1_MRD1 26 101 - -
Enph4g0121 892 MobiDBLite consensus disorder prediction 268 313 - -
Enph4g0121 892 FunFam Multiple RNA-binding domain-containing protein 1 760 866 - -
Enph4g0121 892 MobiDBLite consensus disorder prediction 432 463 - -
Enph4g0121 892 CDD RRM5_RBM19_like 668 748 IPR034423 -
Enph4g0121 892 CDD RRM6_RBM19_RRM5_MRD1 766 840 - -
Enph4g0121 892 SUPERFAMILY RNA-binding domain, RBD 340 441 IPR035979 GO:0003676
Enph4g0121 892 CDD RRM3_RBM19_RRM2_MRD1 353 426 - -
Enph4g0121 892 SUPERFAMILY RNA-binding domain, RBD 544 631 IPR035979 GO:0003676
Enph4g0121 892 MobiDBLite consensus disorder prediction 236 255 - -
Enph4g0121 892 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 669 743 IPR000504 GO:0003723
Enph4g0121 892 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 549 611 IPR000504 GO:0003723
Enph4g0121 892 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 354 424 IPR000504 GO:0003723
Enph4g0121 892 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 96 IPR000504 GO:0003723
Enph4g0121 892 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 768 835 IPR000504 GO:0003723
Enph4g0121 892 CDD RRM4_RBM19_RRM3_MRD1 547 618 - -
Enph4g0121 892 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 351 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph4g0121 Enph-Chr4 2528959 2544639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph4g0121 25 92 Eukaryotic Initiation Factors Gene Family AT1G49760 32.353 3.17e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph4g0121 K14787 - pvy:116143565 1118.99