LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph3g1415	ATGGCAAATTCAACCCACGACGAAGTCGATCTCCAAACCCTACGTTCTGAGCAAGCCCAAGCATTCATGATGGCTAAAGCCCTAGCATCCGATACAGAGTTTGCCTTCGAACTGCAAATGCAAGAAACAGTTACTGCGTCTCTGGCTTCCCAAACCTTCGTTTCTCCCCCACGTGCAGTCGTTTTCTCCGATGACGATAAAGACCGCGATGTTCTGGGCTTGGCGGCGACGCTTATGCTGGAAGATGTGGGCAGGTTCACGCAAGAGCTTAAGGACCACGAACAATGCCAGGCAGAGATGACTAAAATGAGGGATGATCTGGACAATCGGGTTTTTTATCATACTTTCGCGAGAGGCATTCTCAACATTCCCGAGAACCAATGGAGAATGTACGGTGACAATTACCATAGGCCCTACTATGTTGACGGACCATCGTCATCTTCGTCGTCGACGCGGAGCCCTTCCCTGGCTGCAGAGTGTTTCAGAGTTTACAGCAAGGGCTTGCTGAGCGAAGAGTGGGTTAAAGATACGAGGGTGAATCTCGCTGCCCTTGGGAAGCCTCTTAAAGCAGTTGAAACCGGTGGTGTCTTGCTGAGCACTGAATGTGCTGAGCTGCGGGCTATGGTTGTAGGCCTTGATACCGCTCTTAACTTGGGACTACAAAGGGTTACCTTTTTCTGCGATGATTATATGCTTTATCAATATGTCACTGGCAGAGTGCTACCAAGTGCCCATGACAAGTTTGCTGGTCTACTCAATCAGGTATCTGATCTTCAAAGAAAATTTGTATATTGCGAACTATCACTTATTGAACGAAACACTATTAGACATGCTCTTAAATCCGCAAGAGATGCAATAGTTTTTCTAATCAAGTGGTCTGTAGAAAGTGGTGAAGGCAGAAGCTGCAAGGAGACCTGTGCAATTTGTTTTGAAGATACTGATGATGAAAATATGTTTACAGTGAACTACTGCTTGCATAGATATTGCTTTTCGTGTATGAAACAGCATGTGGAAGCAAAGTTGCTTAAAGGGATGATTGCAGAGTGCCCTCTTGAAGGTTGTAAATCTGAGGTGACTGTTGACAGCTGCATAAAATTTTTAGCGCCAGAAATAATTGAAGTGCTCAACAATCGGATTAAGGAATCAGCTATCCCTGTTACAGAGAAAGTGTATTGCCCATTTCCTAGGTGTTAA	1194	0.4531	MANSTHDEVDLQTLRSEQAQAFMMAKALASDTEFAFELQMQETVTASLASQTFVSPPRAVVFSDDDKDRDVLGLAATLMLEDVGRFTQELKDHEQCQAEMTKMRDDLDNRVFYHTFARGILNIPENQWRMYGDNYHRPYYVDGPSSSSSSTRSPSLAAECFRVYSKGLLSEEWVKDTRVNLAALGKPLKAVETGGVLLSTECAELRAMVVGLDTALNLGLQRVTFFCDDYMLYQYVTGRVLPSAHDKFAGLLNQVSDLQRKFVYCELSLIERNTIRHALKSARDAIVFLIKWSVESGEGRSCKETCAICFEDTDDENMFTVNYCLHRYCFSCMKQHVEAKLLKGMIAECPLEGCKSEVTVDSCIKFLAPEIIEVLNNRIKESAIPVTEKVYCPFPRC	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph3g1415	397	FunFam	RBR-type E3 ubiquitin transferase	301	386	-	-
	Enph3g1415	397	ProSitePatterns	Zinc finger RING-type signature.	324	333	IPR017907	-
	Enph3g1415	397	Pfam	Reverse transcriptase-like	199	284	IPR002156	GO:0003676\|GO:0004523
	Enph3g1415	397	SUPERFAMILY	RING/U-box	304	385	-	-
	Enph3g1415	397	Pfam	Zinc finger, C3HC4 type (RING finger)	306	351	IPR018957	GO:0046872
	Enph3g1415	397	ProSiteProfiles	Zinc finger RING-type profile.	306	351	IPR001841	-
	Enph3g1415	397	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	299	385	IPR013083	-
	Enph3g1415	397	PANTHER	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	157	397	IPR031127	GO:0004842\|GO:0016567
	Enph3g1415	397	ProSiteProfiles	TRIAD supradomain profile.	302	397	IPR044066	-
	Enph3g1415	397	Gene3D	-	173	288	IPR036397	GO:0003676

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph3g1415	154	397	C3H Transcription Factor Family	AT2G19610	35.271	3.43e-44	156

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph3g1415	-		-	qsa:O6P43_000295	470.314