Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enph3g1308 | ATGTATAGTAACTTTAAGGAGCAAGCGATAGAGTACGTGAAACAAGCTGTGCAGGAAGACAATGCTGGGAATTATGCAAAAGCGTTTCCTTTGTATATGAACGCGTTAGAGTACTTCAAGACCCATTTGAAGTACGAGAAAAACACTAAGATTAGAGAAGCGATCACCCAGAAATTCACCGAGTATCTGCGGCGGGCCGAGGAGATCCGAGCTGTTCTTGATGACGGAGGGCCTGGCCCGGCGTCCAATGGGGATGCTGCAGTAGCTACGCGGCCCAAGACGAAGCCGAAGGATGGGGAAGGAGATGGGGAGGATCCAGAGCAGTCAAAGCTCAGGGCTGGGCTGAATTCAGCGATCATTCGGGAGAAACCTAATGTGAAGTGGAATGACGTTGCTGGGTTGGAGAGCGCTAAGCAAGCATTGCAGGAGGCGGTCATCTTGCCCGTCAAGTTTCCGCAATTCTTTACTGGTAAAAGACGACCTTGGAGGGCATTTCTGTTGTATGGACCACCTGGAACAGGGAAATCATATTTGGCTAAGGCTGTTGCAACGGAAGCCGACTCCACATTTTTCAGTATTTCTTCATCAGACCTGGTTTCAAAGTGGATGGGTGAAAGTGAAAAGCTTGTTTCAAACCTTTTCCAAATGGCTCGTGAAAGTGCCCCTTCCATCATATTTATTGATGAGATAGATTCTCTATGTGGGCAGCGTGGTGAAGGCAATGAGAGTGAAGCTTCTAGGCGAATCAAAACTGAACTCCTAGTGCAAATGCAGGGTGTAGGAAACAATGATCAGAAAGTTCTTGTGCTTGCAGCAACTAATACACCCTATGCTTTAGATCAGGCAATAAGGCGGCGTTTCGATAAGCGTATATATATTCCGCTACCAGATTTGAAGGCTCGTCAACACATGTTTAAGGCAAGGGCATTATGCATGATTGTGCACTTAGGAGATACCCCCCATAACTTGAGTGAAAGTGATTTTGAACACTTGGCTCGCCGAACAGAGGGGTTTTCAGGTTCAGATATTTCCGTCTGTGTCAAGGATGTTTTGTTTGAGCCTGTTCGTAAAACCCAGGATGCCATGTTTTTCTTCAAGAATCCTGAGGGCATGTGGATCCCTTGTGGCCCGAAGCAAGAGGGTGCTGTACAAGTCTCGATGCAGGATCTTGCTGCAAAGGGACTCGCTTCCAAGATCCTCCCGCCACCTATTACGAGAACAGATTTTGACAAGGTGCTTGCTAGACAAAGGCCTACTGTAAGCAAAGCTGACCTTGAAGTTCATGAGAGATTCACGAAAGAGTTTGGAGAGGAGGGTTGA | 1320 | 0.472 | MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNTKIREAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVATRPKTKPKDGEGDGEDPEQSKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSNLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKARALCMIVHLGDTPHNLSESDFEHLARRTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQEGAVQVSMQDLAAKGLASKILPPPITRTDFDKVLARQRPTVSKADLEVHERFTKEFGEEG | 439 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enph3g1308 | 439 | FunFam | Suppressor of K+ transport growth defect 1 | 6 | 75 | - | - | |
| Enph3g1308 | 439 | Gene3D | - | 297 | 419 | - | - | |
| Enph3g1308 | 439 | Pfam | Vps4 C terminal oligomerisation domain | 372 | 436 | IPR015415 | - | |
| Enph3g1308 | 439 | SMART | smart | 2 | 79 | IPR007330 | - | |
| Enph3g1308 | 439 | FunFam | vacuolar protein sorting-associated protein 4A | 297 | 419 | - | - | |
| Enph3g1308 | 439 | Pfam | MIT (microtubule interacting and transport) domain | 7 | 70 | IPR007330 | - | |
| Enph3g1308 | 439 | Gene3D | - | 6 | 75 | - | - | |
| Enph3g1308 | 439 | MobiDBLite | consensus disorder prediction | 73 | 110 | - | - | |
| Enph3g1308 | 439 | Pfam | ATPase family associated with various cellular activities (AAA) | 166 | 295 | IPR003959 | GO:0005524|GO:0016887 | |
| Enph3g1308 | 439 | CDD | RecA-like_VPS4 | 123 | 293 | - | - | |
| Enph3g1308 | 439 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 119 | 422 | IPR027417 | - | |
| Enph3g1308 | 439 | SUPERFAMILY | MIT domain | 2 | 81 | IPR036181 | - | |
| Enph3g1308 | 439 | ProSitePatterns | AAA-protein family signature. | 267 | 286 | IPR003960 | GO:0005524|GO:0016887 | |
| Enph3g1308 | 439 | FunFam | Vacuolar protein sorting-associated protein 4 | 124 | 304 | - | - | |
| Enph3g1308 | 439 | CDD | MIT_VPS4 | 4 | 77 | IPR045253 | - | |
| Enph3g1308 | 439 | MobiDBLite | consensus disorder prediction | 91 | 109 | - | - | |
| Enph3g1308 | 439 | Gene3D | - | 124 | 427 | IPR027417 | - | |
| Enph3g1308 | 439 | PANTHER | AAA DOMAIN-CONTAINING | 16 | 437 | - | - | |
| Enph3g1308 | 439 | SMART | AAA_5 | 161 | 297 | IPR003593 | GO:0016887 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Enph3g1308 | Enph-Chr3 | 33685891 | 33690666 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Enph3g1308 | 160 | 360 | Calmodulin-binding Proteins | AT3G56690 | 35.961 | 2.24e-33 | 131 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enph3g1308 | K12196 | - | qsa:O6P43_028513 | 828.165 |