Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph3g1306 ATGTATAGCAACTTTAAGGAGCAAGCGATAGAGTACGTGAAACAAGCTGTGCTGGAAGATAATGCTGGGAATTACGCAAAAGCGTTTCCTTTGTATATGAATGCTTTGGAATACTTCAAGACCCATTTGAAGTACGAGAAAAATCCCAAGATTAAAGATGCCATTACCCAGAAATTCACCGAGTATCTTCGGCGGGCCGAGGAGATTCGAGCCGTTCTTGACGACGGAGGACCCGGCCCGGCGTCGAATGGGGATGCTGCGGTAGCTACGCGGCCTAAGACGAAGCCGAAAGATGGCGAAGGAGATGGGGAGGATCCAGAGCAAGCAAAGCTCAGGGCCGGACTGCATTCAGCTATTATTCGGGAGAAACCCAATGTGAAGTGGAACGATGTTGCTGGGTTGGAGAGCGCAAAGCAAGCCTTGCAGGAGGCGGTTATTTTGCCAGTGAAGTTCCCGCAATTTTTCACTGGTAAAAGACGGCCCTGGAGAGCCTTTTTGCTGTATGGGCCACCTGGAACTGGAAAATCATATTTGGCCAAGGCTGTTGCGACTGAAGCTGACTCCACATTTTTCAGTGTTTCTTCATCAGACCTGGTTTCTAAGTGGATGGGTGAAAGTGAAAAGCTAGTTTCAAACCTTTTCCAAATGGCTCGAGAAAGTGCTCCTTCCATTATATTTGTTGATGAAATAGATTCTTTATGTGGTCAGCGAGGAGAAGGTAATGAGAGCGAAGCTTCGAGAAGAATCAAAACTGAACTTTTAGTGCAGATGCAGGGTGTTGGAAACAATGATCAGAAAGTTCTTGTTCTTGCGGCTACAAATACACCATATGCTCTTGATCAGGTGCATCTGGGAGATACTCCTCACAATTTGAGTGAAAGTGATTTTGAACACTTGGCTCGTAGGACGGAGGGGTTTTCAGGTTCAGATATATCTGTCTGTGTTAAGGATGTTTTATTTGAGCCTGTTCGCAAAACCCAAGATGCCATGTTTTTCTTTAAGAACCCGGAGGGTATGTGGATCCCTTGTGGACCAAAGCAACAGAACGCAGTGCAGATTACAATGCAGGATCTTGCTGCTGAAGGACTTGCGTCTAAGATCCTTCCACCCCCTATTACGAGAACAGATTTTGACAAGGTGCTGTCTAGACAAAGGCCTACAGTTAGCAAAGGTGACCTTGAGGTTCATGAGAGATTCACTAAAGAGTTTGGAGAAGAAGGTTGA 1224 0.46 MYSNFKEQAIEYVKQAVLEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKDAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVATRPKTKPKDGEGDGEDPEQAKLRAGLHSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESAPSIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQVHLGDTPHNLSESDFEHLARRTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQQNAVQITMQDLAAEGLASKILPPPITRTDFDKVLSRQRPTVSKGDLEVHERFTKEFGEEG 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph3g1306 407 SUPERFAMILY MIT domain 2 81 IPR036181 -
Enph3g1306 407 FunFam vacuolar protein sorting-associated protein 4A 277 387 - -
Enph3g1306 407 FunFam Suppressor of K+ transport growth defect 1 6 75 - -
Enph3g1306 407 FunFam Vacuolar protein sorting-associated protein 4 124 284 - -
Enph3g1306 407 MobiDBLite consensus disorder prediction 91 107 - -
Enph3g1306 407 Pfam Vps4 C terminal oligomerisation domain 340 404 IPR015415 -
Enph3g1306 407 Gene3D - 281 383 - -
Enph3g1306 407 Pfam MIT (microtubule interacting and transport) domain 7 70 IPR007330 -
Enph3g1306 407 SMART smart 2 79 IPR007330 -
Enph3g1306 407 Pfam ATPase family associated with various cellular activities (AAA) 166 281 IPR003959 GO:0005524|GO:0016887
Enph3g1306 407 CDD MIT_VPS4 4 77 IPR045253 -
Enph3g1306 407 Gene3D - 124 280 IPR027417 -
Enph3g1306 407 PANTHER AAA DOMAIN-CONTAINING 282 405 - -
Enph3g1306 407 SMART AAA_5 161 310 IPR003593 GO:0016887
Enph3g1306 407 MobiDBLite consensus disorder prediction 73 107 - -
Enph3g1306 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 389 IPR027417 -
Enph3g1306 407 Gene3D - 6 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph3g1306 Enph-Chr3 33676404 33681280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph3g1306 160 328 Calmodulin-binding Proteins AT3G56690 32.653 5.49e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph3g1306 K12196 - qsa:O6P43_028513 765.377