LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph3g1062	ATGGGAAAGCAAAGCATATTTGGATATGCAGATAAGGTGGACAAGCTATTGATGCTGTTTGGGACGCTGGGAAGTTTTGGGGATGGGATGCAAACTCCTCTCATGATGTTCATTCTTAGCGACGTCATTAATGCTTATGCAGATCCCAATTCCGTCTTGACAAAGCATGATGTAAATAAGTATGCTTTAAGGATTTTCTACGCTGCAATCGGAGTTGGACTTTCAGCTTTTGTTGAAGGAATGTGTTGGGCAAGAACTGCAGAGAGACAGACTTCAAGAATGAGAGTAGAATACCTGAAATCGGTACTTCGACAAGAAGTTGGCTTCTTTGACACCCAGGCAGCAGGCTCTTCAACAACCTACCAAGTTGTCTCTCTCATTACGGTTGATGCCAACTCAGTTCAAGATGCTTTAAGTGAAAAGATACCCAACTTCCTGGCAGCCATGTCAACATTTTTATCCTGCCACGTCTTTGCATTTGTTCTATCATGGAAACTTACATTGGCAGCTTTACCACTCTCAATCATGTTCATTGTTCCGGCACTTATATTTGGGAAGATCATGTTGGATCTAGCAATGAAAATGATTGAATCTTATGGGGTTGCTGGGGGGATTGCAGAACAAGCAATATCTTCAATAAGAACTGTTTATTCATATGTGGGGGAGAATCAGTCACTGAACAGATTTAGCATTGCACTAGAGAAAACTATGGAACTGGGAATAAAACAAGGTTTTGCAAAGGGGCTGATGTTAGGAAGCCTAGGAGTTATTTATATAAGTTGGGGTTTTCAGGCCTGGGTTGGATCTTTTTTGATCACTGAAAAAGGAGAACAAGGCGGCCATGTATTTGTAGCAGGCTTCAACGTTCTCATGGGAGGCATGAGTGTGTTAGGCGCGCTTCCACATTTAACTGCTATCACAGAAGCAACCGCAGCTGTCGCTCGTCTTTTTGAAATGATTGATAGGGCCAGACACACCAGTCTTACAAGGACTCAGTCTTACAATTCCAGCAGGGAAGAGAATAGGTCTTGTGGGGGTAGTGGTTCAGGCAAGTCCACCATCATTGCATTGCTTGAGAGATTTTATGATCCTGTTGAGGGAGAAATTCTCTTAGATGGCCACAAAATCAATAGACTTCAGTTGAAATGGTTGAGATCTCAACTTGGTCAAGTAAATCAAGAACCTGTTCTTTTTGCGACAACTATAAAAGAGAATATCTTATTTGGAAAAGAAGGGGCTTCAATGGAAAGTGTTATAACTGCAGCTAAAGCGGCAAATGCACATGATTTCATTGTCAAGTTGCCAGATGGATATGAAACCCAAGTAAGTTAA	1332	0.4174	MGKQSIFGYADKVDKLLMLFGTLGSFGDGMQTPLMMFILSDVINAYADPNSVLTKHDVNKYALRIFYAAIGVGLSAFVEGMCWARTAERQTSRMRVEYLKSVLRQEVGFFDTQAAGSSTTYQVVSLITVDANSVQDALSEKIPNFLAAMSTFLSCHVFAFVLSWKLTLAALPLSIMFIVPALIFGKIMLDLAMKMIESYGVAGGIAEQAISSIRTVYSYVGENQSLNRFSIALEKTMELGIKQGFAKGLMLGSLGVIYISWGFQAWVGSFLITEKGEQGGHVFVAGFNVLMGGMSVLGALPHLTAITEATAAVARLFEMIDRARHTSLTRTQSYNSSREENRSCGGSGSGKSTIIALLERFYDPVEGEILLDGHKINRLQLKWLRSQLGQVNQEPVLFATTIKENILFGKEGASMESVITAAKAANAHDFIVKLPDGYETQVS	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph3g1062	443	CDD	ABC_6TM_Pgp_ABCB1_D1_like	18	316	-	-
	Enph3g1062	443	ProSiteProfiles	ABC transporter integral membrane type-1 fused domain profile.	19	308	IPR011527	GO:0005524\|GO:0016020\|GO:0055085\|GO:0140359
	Enph3g1062	443	Pfam	ABC transporter transmembrane region	19	293	IPR011527	GO:0005524\|GO:0016020\|GO:0055085\|GO:0140359
	Enph3g1062	443	PANTHER	ABC TRANSPORTER B FAMILY	5	327	IPR039421	-
	Enph3g1062	443	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	344	442	IPR027417	-
	Enph3g1062	443	SUPERFAMILY	ABC transporter transmembrane region	6	321	IPR036640	GO:0005524\|GO:0016020
	Enph3g1062	443	Gene3D	-	345	442	IPR027417	-
	Enph3g1062	443	Gene3D	ABC transporter type 1, transmembrane domain	5	329	IPR036640	GO:0005524\|GO:0016020
	Enph3g1062	443	MobiDBLite	consensus disorder prediction	330	349	-	-
	Enph3g1062	443	FunFam	ABC transporter B family member 15-like	6	343	-	-
	Enph3g1062	443	Pfam	ABC transporter	345	430	IPR003439	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph3g1062	Enph-Chr3	31792058	31795823	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph3g1062	4	442	Calmodulin-binding Proteins	AT2G36910	36.632	1.72e-89	294

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph3g1062	K05658		-	gmx:100788127	704.131