Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph3g0913 ATGTCTCTCATCAGAGTTTTCCGTTCTCGTAAGTTCTCCAGATCCTTTAGGGGAACTGGGGCTCTGAATGAGGACGACCGTCGCAACGGGATCGCTGGTGGCAGCGAGCCTGAGGCCGGGGAGGACCCCGAGTACGGCAATGCGTGGTCCACCATGCTGCCGGAACTCCTCGGGGAGATCATACGGCGAGTGGAGGCCAGCGAGGAGCAGTGGCCTCACCGCCGGAACGTCGTTGCCTGTGCTTGTGTCTGCAAGAGATGGAGGGATATGACTCGAGAGATCGTACGGTCGCCTTCTAAGAGCGGCAAAATTACTTTTCCTTCTTGCCTTAAGCAGGCAGGACCACGTGATTTACCCCACCAATGTCTTATAAAGAGAAACAAGAAGACTTCAACATTTTACCTATATCTTGCCCTTACACCATCTTTCACAGATAAAGGAAAGCTTCTCTTAGCTGCTAGGAGATATAGGCGTGGTGCTAATGCTGAATATATCATATCACTTGATGCTGATGACTTTTCCCAAGGAAGCAATGCTTATGTTGGAAAGTTAAGCTCGGATTTTCTCGGTACCAACTTCACAATTTACGACAGCCAGCCACCCCATAATGGTGCAAAGCCATCAAGCAGCAGGGCAAGCCGTCGGTTTACCAGCAAGCAGATAAGCCCACAAGTTCCTGCTGGTAACTTTGAGGTGGGACAGGTTTCATACAAGTTCAACATTTTGAAATCAAGGGGGCCTAGAAGGATGGCTTGTTCAATGAAGTGCCCCTCTCCTTTGTCAGGAGAAAGTTCAGATGACAAAAATCTTGATACTGATAAGATGAGCAATAAAGAACATGCCGCATCCGGCTGCTCGATATTGAAGAACAAAGCTCCAAGATGGCATGAGCATTTGCAGTGCTGGTGCTTGAATTTCCATGGTCGTGTGACGGTTGCGTCAGTGAAGAATTTTCAGCTGGTTGCCACAGTGGATCAGAGCCAACCAGGTGGGAAAGGGGATGAAGAAACGGTTCTCCTTCAATTTGGGAAGGTGGGGGATGATACCTTCACCATGGATTACAGGCAGCCCTTATCAGCCTTCCAGGCCTTTGCCATTTGCCTAACAAGCTTCGGCACTAAACTGGCTTGCGAGTAA 1137 0.4934 MSLIRVFRSRKFSRSFRGTGALNEDDRRNGIAGGSEPEAGEDPEYGNAWSTMLPELLGEIIRRVEASEEQWPHRRNVVACACVCKRWRDMTREIVRSPSKSGKITFPSCLKQAGPRDLPHQCLIKRNKKTSTFYLYLALTPSFTDKGKLLLAARRYRRGANAEYIISLDADDFSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSRASRRFTSKQISPQVPAGNFEVGQVSYKFNILKSRGPRRMACSMKCPSPLSGESSDDKNLDTDKMSNKEHAASGCSILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph3g0913 378 ProSitePatterns Tub family signature 1. 306 319 IPR018066 -
Enph3g0913 378 PRINTS Tubby superfamily signature 180 204 IPR000007 -
Enph3g0913 378 PRINTS Tubby superfamily signature 288 305 IPR000007 -
Enph3g0913 378 PRINTS Tubby superfamily signature 306 322 IPR000007 -
Enph3g0913 378 PRINTS Tubby superfamily signature 335 354 IPR000007 -
Enph3g0913 378 PRINTS Tubby superfamily signature 229 256 IPR000007 -
Enph3g0913 378 PRINTS Tubby superfamily signature 164 180 IPR000007 -
Enph3g0913 378 PRINTS Tubby superfamily signature 356 378 IPR000007 -
Enph3g0913 378 Pfam F-box domain 54 96 IPR001810 GO:0005515
Enph3g0913 378 MobiDBLite consensus disorder prediction 18 45 - -
Enph3g0913 378 PANTHER TUBBY-RELATED 45 376 - -
Enph3g0913 378 ProSitePatterns Tub family signature 2. 363 378 IPR018066 -
Enph3g0913 378 CDD F-box_AtTLP-like 49 93 - -
Enph3g0913 378 Gene3D Tubby Protein; Chain A 105 378 IPR025659 -
Enph3g0913 378 SUPERFAMILY Tubby C-terminal domain-like 98 378 IPR025659 -
Enph3g0913 378 MobiDBLite consensus disorder prediction 199 220 - -
Enph3g0913 378 Pfam Tub family 110 373 IPR000007 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph3g0913 Enph-Chr3 30497618 30500887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph3g0913 1 378 TUB Transcription Factor Family AT1G53320 71.979 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Enph3g0913 Tub 5.6e-102 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph3g0913 K19600 - qsa:O6P43_001049 633.254