Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph3g0710 ATGGCAGCCTCTTCTACTACAACTGCTGCGCCTCCGCGCCAGCTATCGCCGAAGGAGACGGACATTCAGATGATGTTAGCGGCCGAGGTTCACCTTGGGACCAAAAATTGTAACTTTCAAATGGAGCGATATGTCTTTAAGCGCCGCAATGATGGTATTTACATAATCAACCTTGGTAAGACATGGGAGAAGCTTCAGCTTGCTGCCAGGGTTATTGTTGCCATAGAGAACCCTCAGGATATTATAGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCAGTTCTCAAGTTTGCTCAATACACAGGTGCACATGCACTTGCTGGAAGGCACACTCCAGGAACATTCACTAACCAGCTCCAGACATCCTATAGTGAGCCTCGCCTGCTTATCCTTACCGATCCTAGAACAGATCACCAGCCCATTAAGGAAGCTGCACTTGGAAATATACCGACTATTGCCTTTTGTGACACTGATTCTCCTATGCGGTATGTTGACATTGGCATTCCTGCCAACAATAAAGGAAAGCACAGCATAGGCTGTCTCTTTTGGCTATTAGCTAGGATGGTTCTGCAGATGCGGGGTACCATTCGACCAGGGCTTAAGTGGGATGTGATGGAGAATGGGGTGAATCTGTTGCAGCTCCACAAGTTCCTCTCCAACAAACTCCTACCCCTGGAATTGAGTCTTTGCCTGGCCCTGGAATTGAGAATGTACCTGCCACTGGTTGGGATTAATTGA 738 0.481 MAASSTTTAAPPRQLSPKETDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMENGVNLLQLHKFLSNKLLPLELSLCLALELRMYLPLVGIN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph3g0710 245 Gene3D - 21 214 - -
Enph3g0710 245 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 Pfam Ribosomal protein S2 123 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 SUPERFAMILY Ribosomal protein S2 17 205 IPR023591 -
Enph3g0710 245 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 FunFam 40S ribosomal protein SA 21 215 - -
Enph3g0710 245 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 Hamap 40S ribosomal protein SA [rps-0]. 9 236 IPR027498 GO:0003735|GO:0006412|GO:0015935
Enph3g0710 245 PANTHER 40S RIBOSOMAL PROTEIN SA 12 206 IPR005707 GO:0003735|GO:0006412|GO:0015935
Enph3g0710 245 NCBIfam 30S ribosomal protein S2 18 207 IPR005707 GO:0003735|GO:0006412|GO:0015935
Enph3g0710 245 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Enph3g0710 245 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph3g0710 Enph-Chr3 28112207 28115703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph3g0710 1 205 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 85.854 4.77e-134 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph3g0710 K02998 - gmx:100805318 396.356