Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph3g0545 ATGATAAATTCTGAGACGAAAAAAGCCCTGACATGGTTGGCTAGACTTTCTCCTGAAAAGCTGGCTGAAATGGGAAAAAATGGCACACGGGGTCCTGTTTTAAGTACCTGCACTGTGTCTAGTGGATATCTTCATCCATACCACAAGATATTTCAAGCATTTGGTCTCATTAAGAGACTAGAGAAAGGTGTAACCAAGTGGTACTGTCCTCAAAATCTAAATAATTTGGCTTTTGATGTAGTTGCCCTTGGCATGGCTCTGCGTGAGCCGTTAGATTCATTTAGGCTATACTTGTCAAGAGCAACTCTTGTAGTTGTTCCTGCTAACTTGGTCGATCATTGGAAAACACAAATAGAAAAGCATGTCAAACATAGTCAACTGCGAGTTTATGTTTGGACTGATACTTGGAAGTGGAAGCCATCTGTGCACAGTCTGGCATGGGATTATGATGTCGTCATTACTACATTTAGTCGTCTGAGTGCAGAGTGGAGCCCACGGAAGAGAAGTGTTTTGATGCAAGTCCATTGGCTGAGGATCATGTTAGATGAAGGGCACACTCTTGGCTCAAGCCTAAACTTAACAAACAAGTTGCAAATGGCTATTTCATTGACAGCTTCAAATCGTTGGATACTAACAGGAACACCAACACCTAACACTCCTAAAAGCCAGTTATCACATTTGCAACCATTGCTAAGGTTCCTTCATGAAGAAGCTTATGGGCTGAATCCAAAGTCATGGGAAGTTGGCATACTTAAGCCATTTGAGGCAGAGATGGAGGAAGGAAGGTCTCGCTTGTTGCATCTACTTCGTAACTGCATGATTAGTGCAAGGAAGGTAGACTTGCATAATATCCCTCCATGTATCAAGAAAGCTGTTTTTCTAGATTTTACTGAGGAGCATGCCAGAAGTTATAATGAATTGGTACTAACTGTTCGTCGTAATATATTGATGGCTGATTGGAATGATCCTTCACATATTGAGAGTCTATTGAATCCAAAACAATGGAAATTTAGGAGTGCAACTATAAAAAATGTCAGACTTTCGTGCTGTGTTGCTGGACATATTAAAATTACACATGCTGGTGAAGATATTCAGGAAACAATGGACATGTTAGTACAAAGTGGTTTGGATTCTGATTCAGCTGAATATTCCTCTGTAAGATATAATCTCCTTTGTGGTGGCCGCTGTGTCAGGTGCAAGGAATGGTGCCGCCTTCCGTTTATTACACCATGTCGGCATCTATTGTGCCTTGACTGTGTTGCTTTAGACAGTATGAAGTGTACTTATCCTGGGTGCAATAAATTATATGAGATGCAGAACCCTGATACATTAGCCCGCCCTGAAAATCCTAACCCAAAGTGGCCTGTACCCAAAGATCTTATTGAGTTACAACCTTCATATAAACAGGCAGGGTTTGATAATTGGGATCCTGATTGGCAATCGACATCTAGCAGCAAGGTCTCCTATCTTGTTCAGCGATTGAAAGCATTACAAGAATCCAATAAGGAGAAAGGCTACTATTTGAACTATAGTGATGATCAGGTTCTTGCTGAGAGCAGTTTCCCTCTGCGGATGAGAGATGTGAGAGCATCTTTCAAGCAATGCCCTCAAAGCACTGATCCCAAAAATATGCCTGAGAAAGTTCTGATATTTTCTCAATTTCTTGAGCATATACATGTTATTGAACAGCAGTTGACAATTGCAGGTATTAAATATACTGGGATGTATAGTCCAATGCATTCAAGCAACAAGAAAAAGTCACTGGCCACATTCCAGCACGATCCCAGCTGTATGGCACTTGTGATGGATGGAAGTGCTGCATTGGGTCTTGATTTGAGTTTTGTTACACACGTTTTTTTTAACGGAACCAATCTGGGATAG 1881 0.411 MINSETKKALTWLARLSPEKLAEMGKNGTRGPVLSTCTVSSGYLHPYHKIFQAFGLIKRLEKGVTKWYCPQNLNNLAFDVVALGMALREPLDSFRLYLSRATLVVVPANLVDHWKTQIEKHVKHSQLRVYVWTDTWKWKPSVHSLAWDYDVVITTFSRLSAEWSPRKRSVLMQVHWLRIMLDEGHTLGSSLNLTNKLQMAISLTASNRWILTGTPTPNTPKSQLSHLQPLLRFLHEEAYGLNPKSWEVGILKPFEAEMEEGRSRLLHLLRNCMISARKVDLHNIPPCIKKAVFLDFTEEHARSYNELVLTVRRNILMADWNDPSHIESLLNPKQWKFRSATIKNVRLSCCVAGHIKITHAGEDIQETMDMLVQSGLDSDSAEYSSVRYNLLCGGRCVRCKEWCRLPFITPCRHLLCLDCVALDSMKCTYPGCNKLYEMQNPDTLARPENPNPKWPVPKDLIELQPSYKQAGFDNWDPDWQSTSSSKVSYLVQRLKALQESNKEKGYYLNYSDDQVLAESSFPLRMRDVRASFKQCPQSTDPKNMPEKVLIFSQFLEHIHVIEQQLTIAGIKYTGMYSPMHSSNKKKSLATFQHDPSCMALVMDGSAALGLDLSFVTHVFFNGTNLG 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph3g0545 626 Gene3D - 81 277 IPR038718 -
Enph3g0545 626 CDD SF2_C_SNF 546 620 - -
Enph3g0545 626 Pfam SNF2-related domain 96 319 IPR000330 GO:0005524|GO:0140658
Enph3g0545 626 Gene3D - 478 622 IPR027417 -
Enph3g0545 626 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 66 233 IPR014001 -
Enph3g0545 626 ProSitePatterns Zinc finger RING-type signature. 411 420 IPR017907 -
Enph3g0545 626 CDD RING-HC 395 420 - -
Enph3g0545 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 620 IPR027417 -
Enph3g0545 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 273 IPR027417 -
Enph3g0545 626 SMART ultradead3 42 247 IPR014001 -
Enph3g0545 626 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 98 620 - -
Enph3g0545 626 CDD DEXDc_SHPRH-like 88 274 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph3g0545 101 619 RAD5 or RAD16-like Gene Family AT5G22750 23.792 2.24e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Enph3g0545 SNF2_N 3.9e-68 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph3g0545 - - pcin:129315314 1163.29