Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph3g0235 ATGCAAAAAATATTTATCGTACTTATGATAATGGCAGAAGGAAATGAAGTAACATTTAACGATCTTGGCTTATCTGAGCCACTTGTGGAAGCTTGTGAAAGGTTGGGTTGGAAGAAGCCATTGAAAATTCAAGCTGAAGCGATTCCTCTTGCACTGGAAGGAAAAGATGTTATTGGGCTTGCGCAAACTGGTTCGGGAAAGACTGGTGCTTTTGCACTCCCCATACTGCATGCCCTTTTAGACGCACCACGACCGAAAGATTTTTTTGCCTGTGTGTTGTCTCCCACAAGAGAGCTTGCTATTCAAATCTCAGAGCAGTTTGAAGCGTTAGGTGCTGAAATTGGTGTCAAGTGTGCTGTGCTAGTTGGAGGGATTGACATGGTGCAACAAGCTATCAAGATAGCAAAGCAGCCTCATATAATTGTTGGGACACCTGGACGTGTTTTAGACCACCTAAAGAACACTAAAGGTTTTACTCTGAACAGATTGAAATATTTGGTCTTAGATGAGGCTGACAGGCTATTGAATGAAGATTTTGAAGAATCTCTCAATGAGATTCTGCAAGGTATCCCTCAGCAGCGAAGAACATTTCTATTTTCTGCTACCATGACTAAGAAGGTCCAGAAACTTCAAAGGGTTTGTTTAAGGAATCCTGTAAAGATTGAAGCAGCGTCTAAATATTCAACTGTTGACACACTAAAGCAGCAGTATTGCTTTTTGCCTGCTAAGCACAAGGATTGCTACCTGGTTTTTATTCTGACTGAAATGGCTGGTAGTACATCCATGGTATTTACACGCACATGTGATGCAACCCAGCTCCTGGCTTTGACACTTAGAAATTTGGGTCTCAAAGCCATCCCTATCAATGGTCATATGAGCCAGTCAAAGAGGCTCGGAGCTTTGAATAAGTTCAAGTCTGGAGATTGCAACATTCTCATTTGTACTGATGTGGCAAGTAGAGGACTGGACATCCCTACAGTAGATATGGTTATCAACTATGATATCCCGACAAACTCCAAGGATTATATACATCGTGTGGGAAGAACTGCTCGTGCTGGGCGATCTGGGGTTGCGATTTCACTTGTAAATCAATATGAGCTGGAGTGGTACATTCAGATAGAGAAGCTTATCGGTAAGAAATTACCAGAGTATCCTGCACAGGAAGAAGAGGTTTTGCTTCTGGAAGAGCGTGTTAGTGAGGCCAAAAGATTATCAGTAATGAAAATGAAGGAGAATGGAGGGAAGAGGAGACGAAAGGGAGGAGATCATGAGGAGGAAGAAGATATTGAGAAATACCTCGGTCTCAAGGATGGAAAATCTTCCAAGAAGTTCAAAAGAAAATAG 1344 0.4204 MQKIFIVLMIMAEGNEVTFNDLGLSEPLVEACERLGWKKPLKIQAEAIPLALEGKDVIGLAQTGSGKTGAFALPILHALLDAPRPKDFFACVLSPTRELAIQISEQFEALGAEIGVKCAVLVGGIDMVQQAIKIAKQPHIIVGTPGRVLDHLKNTKGFTLNRLKYLVLDEADRLLNEDFEESLNEILQGIPQQRRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYCFLPAKHKDCYLVFILTEMAGSTSMVFTRTCDATQLLALTLRNLGLKAIPINGHMSQSKRLGALNKFKSGDCNILICTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVSEAKRLSVMKMKENGGKRRRKGGDHEEEEDIEKYLGLKDGKSSKKFKRK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph3g0235 447 SMART helicmild6 272 353 IPR001650 -
Enph3g0235 447 Pfam Helicase conserved C-terminal domain 249 353 IPR001650 -
Enph3g0235 447 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 167 175 IPR000629 -
Enph3g0235 447 SMART ultradead3 36 236 IPR014001 -
Enph3g0235 447 CDD SF2_C_DEAD 233 362 - -
Enph3g0235 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 374 IPR027417 -
Enph3g0235 447 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 248 392 IPR001650 -
Enph3g0235 447 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 48 221 IPR014001 -
Enph3g0235 447 MobiDBLite consensus disorder prediction 405 432 - -
Enph3g0235 447 Gene3D - 11 226 IPR027417 -
Enph3g0235 447 CDD DEADc_DDX47 18 222 IPR044765 GO:0005524
Enph3g0235 447 Pfam DEAD/DEAH box helicase 42 210 IPR011545 GO:0003676|GO:0005524
Enph3g0235 447 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 17 45 IPR014014 GO:0003724
Enph3g0235 447 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 15 424 - -
Enph3g0235 447 Gene3D - 227 399 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph3g0235 Enph-Chr3 18175536 18185741 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph3g0235 18 385 Eukaryotic Initiation Factors Gene Family AT3G19760 32.258 6.13e-66 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph3g0235 K14777 - gmx:100775796 736.487