Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph3g0196 ATGGCGTACGCTGCGATGAAGGCCACTAAGCCGGGTCTGGAGGAGCCCCAAGAGCAGATTCATAAGATCAGAATCACGCTTTCCTCGAAGCACGTCAAAAATCTTGAGAAAGTTTGTGCTGACTTGGTTCGTGGGGCCAAAGACAAGAGGCTTAGGGTTAAGGGACCTGTGAGAATGCCTACAAAAGTTCTTCACATCACCACCAGGAAATCTCCCTGCGGTGAAGGTACCAACACATGGGACCGATTTGAGCTTAGAGTACACAAGAGAGTAATTGATCTCTACAGTTCACCGGATGTGGTTAAGCAGATCACATCCATAACAATTGAACCTGGTGTGGAGGTTGAGAGGAAAGAGTGGACAATGGCGTACGCTGCGATGAAGCCCAATAAGCCAGGTTTGGAGGAGCCCCAGGATCAGATTCACAAAATCAGGATTACATTATCCTCGAAGCATGTGAAGAATCTTGAAAAAGTTTGTACTGACTTGGTTTTTGGTGCTAAGGAGAAGAGGCTTAGTGTCAAGGGACCTGTGAGAATGCCCACAAAAGTTCTTCATATTACCACTAGGAAATCTCCCTGTGGTGAAGGTACCAACACATGGGACAGATTTGAACTTAGGGTGCACAAGAGAGTGATTGACCTCTACAGTTCACCGGAGGTGGTTAAGCAAATCACTTCAATTACAATTGAACCTGGTGTGGAGGTTGAGGTCACCATCGCAGATGTTTAA 732 0.4645 MAYAAMKATKPGLEEPQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVERKEWTMAYAAMKPNKPGLEEPQDQIHKIRITLSSKHVKNLEKVCTDLVFGAKEKRLSVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPEVVKQITSITIEPGVEVEVTIADV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph3g0196 243 ProSitePatterns Ribosomal protein S10 signature. 167 182 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Enph3g0196 243 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 135 242 IPR001848 GO:0003735|GO:0005840|GO:0006412
Enph3g0196 243 NCBIfam 30S ribosomal protein S10 21 116 IPR005729 GO:0003735|GO:0006412|GO:0015935
Enph3g0196 243 NCBIfam 30S ribosomal protein S10 142 240 IPR005729 GO:0003735|GO:0006412|GO:0015935
Enph3g0196 243 Gene3D Ribosomal protein S10 domain 127 242 IPR036838 -
Enph3g0196 243 Gene3D Ribosomal protein S10 domain 6 118 IPR036838 -
Enph3g0196 243 PRINTS Ribosomal protein S10 family signature 57 72 IPR001848 GO:0003735|GO:0005840|GO:0006412
Enph3g0196 243 PRINTS Ribosomal protein S10 family signature 79 93 IPR001848 GO:0003735|GO:0005840|GO:0006412
Enph3g0196 243 PRINTS Ribosomal protein S10 family signature 22 35 IPR001848 GO:0003735|GO:0005840|GO:0006412
Enph3g0196 243 Hamap 30S ribosomal protein S10 [rpsJ]. 20 119 IPR001848 GO:0003735|GO:0005840|GO:0006412
Enph3g0196 243 SMART Ribosomal_S10_2 24 118 IPR027486 -
Enph3g0196 243 SMART Ribosomal_S10_2 145 239 IPR027486 -
Enph3g0196 243 SUPERFAMILY Ribosomal protein S10 143 240 IPR036838 -
Enph3g0196 243 ProSitePatterns Ribosomal protein S10 signature. 46 61 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Enph3g0196 243 FunFam 40S ribosomal protein S20 128 242 - -
Enph3g0196 243 Pfam Ribosomal protein S10p/S20e 145 239 IPR027486 -
Enph3g0196 243 Pfam Ribosomal protein S10p/S20e 24 116 IPR027486 -
Enph3g0196 243 FunFam 40S ribosomal protein S20 7 121 - -
Enph3g0196 243 Hamap 30S ribosomal protein S10 [rpsJ]. 141 240 IPR001848 GO:0003735|GO:0005840|GO:0006412
Enph3g0196 243 SUPERFAMILY Ribosomal protein S10 22 117 IPR036838 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph3g0196 Enph-Chr3 15876408 15887539 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph3g0196 123 242 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 88.333 8.13e-73 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph3g0196 K02969 - cpap:110823078 231.491