LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph3g0060	CCTTCGACGGGGTCTTCTATCGACTCTGACACTGCCGCCTCATCCTCGCCGGCGACTGGGTCAACCCAAGCAACAAGGTTGACTGCTGCTCGCCAGATTGGAGACATTGCAAAATCTCATCCTCAAGACCTTATCAGTCTACTAAAGAAGGTATCTCAATGTCTACACAGTAAAACTTGGGATACAAGAGTTGCAGCAGCCCATGCAATTGGGGCAATTGCTGAGAATGTTAAGCACACTAGCTTGAATGAACTTATTGCTGCTGTTGCAACAAAAATGTCTGAAGTTGGGATATCCGGTAGTATTGAAGATATGTGTGCGTGGCCTTACTTACAATCTAAAATTACGGGAAGTGCATTTAGGAGCTTTGACCTTAACAAGGTGCTTGAGTTTGGCGCCCTATTAGCATCTGGAGGACAGGAGTATGATGTAGGAAGTGATAATGTAAAGAACCCAAAGGAGCGACTGGCTCGCCAGAAGCAAAATCTTCGACGTCGCTTAGGTTTAGATGTGTGCGAACAATTTATGGATATTAGTGATGTGATAAGGGATGAAGATCTTGTGGCATACAAATCAGATTTACATCCGTATGGAATTGATCAAGGAGTTTTTACATCTCATTCTGTACATAACATCCAGAAAATGGTTGCTAATATGGTTCCTAGTGTTAAATCGAAGTGGCCAAGTGCAAGAGAACGGAATCTCTTAAAACGTAAAGCAAAGATGAACTCAAAAGACCAAACAAAAAGCTGGTGTGAGGATGGGAGTACAGAGGCATCACTTGCTCAAAATGTGACTTCTAGAGGCACATATTCTGATTCAGTAAACTACAATAAGGTTTTAGTTGATAATAATCATGATGAAGATGGATTTGATTTTGATGGAGATGGACGATGGCCTTTTCACATTTTTGTTGACCAACTTATTATTGATATGTTTGATCCTGTTTGGGAGGTACGGCATGGTAGTGTGATGGCATTGAGGGAGATCTTGACCCATCAAGGTGCATCTGCTGGAGTATTAAAACCCGACTCACACTTGGGGGGAGAACTATTTCTTGAATTCGAAGATAAAAGTATTTCAAATGTATCAAAGAGAGAAAGGGAGATTGATTTGAATATGCAAATTTCAGTGGATGAGCTTGATTCAAACATCAAGAGGCCCAAGCTTGAAGATGTGTCATCCTCTTCCATGGATAACATGACCATTTGCAGCAATGGAGGTGACATTGAAATTAACATTAGTACTGAAACATGTGGATGCAATTTACCTTCGGATGTTAGGAATGGGCAATTTAATGATGATGCTGTTGACTTGGATCTGGAATCTAATTCTGAGGGTTTAAGTCATTATTTCAAGGAACCTACTAATATCACTGAGCAGAAGAATTGTTCTGGTGGGGATAAGAATCCATCTGGCAATCTTAATGGACTTCCTCAGAATTGTGACCTTCTAAACTTGGTTAATGTGGCCAGAAGTTCCTGGCTTCAAAACTACGGATTTCTTCAAGATTGTGTAATACGCTTCTTGTGTGTGTTGTCACTAGATCGCTTTGGAGATTATGTATCTGATCAGGTTGTTGCTCCTGTTCGGGAAACCTGCGCACAAGCATTAGGAGCTGCATTCAAGTACATGCATCCGGCATTAGTAAAGGAAACATTAAATATATTGCTGAAAATGCAGTGTAGAGCTGAATGGGAGATTCGTCATGGCAGCCTTTTAGGTATCAAATATTTAGTGGCAGTACGGCAGGACCCAGATGATGATGTCCGAGCAGTTGCTGCTGATGCTTTAATACCAGCTGCAGCTGCAATTGTTGCTTTGCAGGGTCAAACTCTACACTCAATTGTTATGCTATTGTGGGACATTTTGCTTGATTTGGATGATTTAAGCCCATCCACTAGCAGTGTAATGAATCTTCTGGCAGAAATTTATTCTCAGAATGAGATGGTTCCAAAAATGAATAGATCAGTTGAATTGGGAGATACAGAAATGGTCAATGTAATTGGAGCTGGCGGCGTCAGTAGTGATAATGACAAAAATCCTTTTATGCTTTCAATGTTGGCACCACGCTTGTGGCCGTTTATGAGGCATAGTATCACATCTGTTCGGTTTTCAGCAATTCGCACTTTGGAGAGACTGCTTGAAGCTGGATATAAGAGAAGCATGTCTAAGCAATCTGGTTCTTCTTTTTGGCCTTCTTTTATACTTGGAGATACCCTTCGAATTGTTTTTCAGAATCTGCTATTGGAATCAAATGAGGCAATTTTGCAGTGTTCCGAGAGAGTTTGGAGGCTCCTTGTTCAGTGTTCAGTGGAGGACTTGGAGACTGCTGCAAGATCTTACATGAATTCTTGGATAGCACTTGTTTCTACCCCATTTGGTTCAGTGTTAGACACCTCAAAAATGTTTTGGCCTGTTACCTTTCCTCAAAAAAGTCAATCTAGAGCAGCAGCTAAGATGAGAGCTGTGAAGGTTGAAACTGAATCTGGTGGGGATCTTGGTTTGGATTATACTAAAGGAATTAGTCTCCAAGAAAGAAATGGAGATATTTCCATGGGTTCTGTCAAGATTGTTGTGGGTTCTGATGTGGATACATCAGTAACTAATACTAGAGTGATTACTGCTACTGCATTGGGAATTTTCATTTCTAAGCTTCCTGAGGTTTCCATAAAAGATGTGATTGATCCGCTGTGGAATGCTCTTACCTCTTTGTCTGGTGTCCAGCGTCAGGTTGCGTCCATGGTACTTATTTCTTGGTTCAAGGAGATGAAAAGAAGTAAGTTATCTGAAGACCTTCAGATTATACCTGGTGTCCCAAATTATCTCAAAGAATGGCTGTTGGAATTATTGACATGTTCTGATCCTGCATTTCCGACAAAGGGTTCATTTCTTCCTTATGTTGAGCTTTCAAGAACATATTCAAAGATGCGTAATGAGGCTGGTCAATTACTTAATGCAATGAAATGTTCTGGTGTGTTTGATGAGTTATTGTCAACTGTGAAAATTGAGTTGGAGAGCTTGAGTGTGGATGATACCATTAATTTTGCTTCAAAAGTTCCGGCTTTGTCATGTGATAGTGTTGAAAATGAGTCATTGGGAAGAAACATCATGGATGATATTGAATCATCAAAACAGAGACTCTTGACAACTTCTGGCTATTTAAAATGTGTTCAGAGCAATTTGCATGTTACGGTTTCATCTGCAGTTGGAGCTGCAGTTGTCTGGATGTCAGAATTTCCTTCACGTCTCACCCCAATTATTCTGCCATTGATGGCTTCAATAAAACGAGAGCAGGAGGAAATACTGCAAATGAAGTCAGCTGAGGCTCTGGCTGAGCTTATGTATCACTGTGTTGATCGTAGACCTTGCCCCAATGATAAATTAATAAAGAATATTTGTTGTTTGACTTGTATGGATCCCTCTGAGACACCTCAAGCTGAATCCATTAGATCCATGGAGAGTATTGATGACCAAGGTCTTATGTCCTTTGGGACTCCTGTGGCTAAACAGAGATCAAAGACCCATGTGCTGGGTGGTGAAGATCGATCAAAGGTGGAGGGCTTTATCGGTAGACGTGGATCTGAACTCTCACTTAGATTTTTATGTGAGAAGTTTGGTGCTTCATTATTTGATAAGCTTCCTAAGCTGTGGGATTGCCTTACTGAGGTGCTCAAGCCAAGCTCTGCCGAATCTCTAGCTGCTTATGAAAAAGAAGTCACTTTGGTTGTTGAGTCTGTTAGCAATCCCCAGATCTTGATTAACAATATTCAGTTCCATGCCACTTATGGAAAACCACTTCTAGTTGCAAGAGATCCCAAGTGCTCTGCTAGGGATGCTGAAGCAGGAGTTCTTGCTATGGAAGCATTACATAAGCAGGTCATGCCTTTTCTTCTCCGTCGAACAAAGCAAGAAGTCTTGTCTGATCTGCCAGAAAAAATAATCCAAGACAGATACTGTGATTTAAGTCCTGTACAGCTTAAACTCTATGAACATTTTTCTGGTTCTCATGTTAAACAAGAAATTTCATCTATAGTAGCAATGAATGAAACAGCTGCCACAGAAGGAAGCAGCAGATCACCCAAAGCATCTTCACATGTCTTCCAGGCACTCCAATACTTGCTTAAGTTGTGCAGTCATCCTTTGCTTGTCGTTGGTGAGAAGGTCCCTGATCAGCTCTCTACTGTTCTCTCAGAATTGTTGCCTGCTGGCTCCGAAATCATTTCAGAACTTCACAAACTACATAACTCCCCGAAATTGGTTGCTCTCCAAGAGATCTTGGAAGAGTGTGGAATAGGAGTTGATGCTTCAGGTTCTGAGAGTGCAGTTAGCATTGGTCAGCACAGGGTCCTGATATTTGCTCAACATAAGGCTTTTCTGGATATTATTGAAAGAGATTTGTTCCAGATATACATGAAGAATGTCACATATTTGCGACTGGATGGATCTGTTGGGCCAGAGAAGCGTTTTGACATTGTTAAAACATTCAACTCAGACCCTACCATTGATGTCTTGTTGCTTACAACACACGTGGGTGGCCTTGGTTTGAACCTTACATCTGCAGATACCCTTGTTTTTGTGGAGCATGACTGGAATCCTATGCGAGATCATCAGGCTATGGACAGAGCACATCGCTTAGGTCAGAAAAAGGTTGTTAATGTTCACCGTCTTATAATGCGTGGTACATTGGAAGAGAAGGTCATGAGTCTACAAAGGTTCAAAGTCTCGGTGGCTAATGCTGTCATTAATGCTGAAAATGCCAGTATGAAAACAATGAATACAGATCAGTTACTTGATTTGTTTGCATCAGCAGAAACCTCAAAGAAGGGAGCTTCTGCTGCAAACCGTTCAAATAACACGGATGGGGATACTAAATTAGTAGGTGGCGGGAAGGGGTTGAAAGCAATACTTGGAGGTTTGGAAGAGCTTTGGGACCATTCACAATATACAGAAGAGTACGATCTGACACAATTTTTGTCAAAGCTTAATGCATGA	4995	0.412	PSTGSSIDSDTAASSSPATGSTQATRLTAARQIGDIAKSHPQDLISLLKKVSQCLHSKTWDTRVAAAHAIGAIAENVKHTSLNELIAAVATKMSEVGISGSIEDMCAWPYLQSKITGSAFRSFDLNKVLEFGALLASGGQEYDVGSDNVKNPKERLARQKQNLRRRLGLDVCEQFMDISDVIRDEDLVAYKSDLHPYGIDQGVFTSHSVHNIQKMVANMVPSVKSKWPSARERNLLKRKAKMNSKDQTKSWCEDGSTEASLAQNVTSRGTYSDSVNYNKVLVDNNHDEDGFDFDGDGRWPFHIFVDQLIIDMFDPVWEVRHGSVMALREILTHQGASAGVLKPDSHLGGELFLEFEDKSISNVSKREREIDLNMQISVDELDSNIKRPKLEDVSSSSMDNMTICSNGGDIEINISTETCGCNLPSDVRNGQFNDDAVDLDLESNSEGLSHYFKEPTNITEQKNCSGGDKNPSGNLNGLPQNCDLLNLVNVARSSWLQNYGFLQDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPALVKETLNILLKMQCRAEWEIRHGSLLGIKYLVAVRQDPDDDVRAVAADALIPAAAAIVALQGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQNEMVPKMNRSVELGDTEMVNVIGAGGVSSDNDKNPFMLSMLAPRLWPFMRHSITSVRFSAIRTLERLLEAGYKRSMSKQSGSSFWPSFILGDTLRIVFQNLLLESNEAILQCSERVWRLLVQCSVEDLETAARSYMNSWIALVSTPFGSVLDTSKMFWPVTFPQKSQSRAAAKMRAVKVETESGGDLGLDYTKGISLQERNGDISMGSVKIVVGSDVDTSVTNTRVITATALGIFISKLPEVSIKDVIDPLWNALTSLSGVQRQVASMVLISWFKEMKRSKLSEDLQIIPGVPNYLKEWLLELLTCSDPAFPTKGSFLPYVELSRTYSKMRNEAGQLLNAMKCSGVFDELLSTVKIELESLSVDDTINFASKVPALSCDSVENESLGRNIMDDIESSKQRLLTTSGYLKCVQSNLHVTVSSAVGAAVVWMSEFPSRLTPIILPLMASIKREQEEILQMKSAEALAELMYHCVDRRPCPNDKLIKNICCLTCMDPSETPQAESIRSMESIDDQGLMSFGTPVAKQRSKTHVLGGEDRSKVEGFIGRRGSELSLRFLCEKFGASLFDKLPKLWDCLTEVLKPSSAESLAAYEKEVTLVVESVSNPQILINNIQFHATYGKPLLVARDPKCSARDAEAGVLAMEALHKQVMPFLLRRTKQEVLSDLPEKIIQDRYCDLSPVQLKLYEHFSGSHVKQEISSIVAMNETAATEGSSRSPKASSHVFQALQYLLKLCSHPLLVVGEKVPDQLSTVLSELLPAGSEIISELHKLHNSPKLVALQEILEECGIGVDASGSESAVSIGQHRVLIFAQHKAFLDIIERDLFQIYMKNVTYLRLDGSVGPEKRFDIVKTFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASMKTMNTDQLLDLFASAETSKKGASAANRSNNTDGDTKLVGGGKGLKAILGGLEELWDHSQYTEEYDLTQFLSKLNA	1664

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph3g0060	1664	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	1302	1603	IPR027417	-
	Enph3g0060	1664	PANTHER	TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172	1250	1663	IPR044972	GO:0003677\|GO:0016887\|GO:0017025
	Enph3g0060	1664	FunFam	TATA-binding protein-associated factor 172	1311	1627	-	-
	Enph3g0060	1664	ProSiteProfiles	Superfamilies 1 and 2 helicase C-terminal domain profile.	1438	1593	IPR001650	-
	Enph3g0060	1664	Gene3D	-	18	95	IPR011989	-
	Enph3g0060	1664	SUPERFAMILY	ARM repeat	21	1427	IPR016024	-
	Enph3g0060	1664	Gene3D	-	1311	1626	IPR027417	-
	Enph3g0060	1664	MobiDBLite	consensus disorder prediction	1	24	-	-
	Enph3g0060	1664	Pfam	Helicase conserved C-terminal domain	1447	1547	IPR001650	-
	Enph3g0060	1664	Pfam	Domain of unknown function (DUF3535)	763	1220	IPR022707	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph3g0060	Enph-Chr3	6022133	6085366	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph3g0060	1417	1601	RAD5 or RAD16-like Gene Family	AT5G22750	34.409	2.30e-23	106

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SNF2	Enph3g0060		DUF3535	5.8e-100	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph3g0060	K15192		-	gmx:100777977	1821.21

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