Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph2g2174 ATGGCCACCTCCCAGCATCGATGCGTTTTTGTTGGGAATATACCGTATGATGCCACAGAGGAACAGCTTATTGAAATCTGCCAGGAGGTTGGGCCTGTAGTGTCATTCAGATTAGTTATTGATAGAGAAACTGGAAAACCAAAAGGTTATGGATTCTGTGAGTATAAGGATGAAGAGACAGCTCTAAGTGCCCGTCGTAACCTTCAGGGTTATGAGATTAATGGGCGGCAATTGCGTGTTGATTTTGCTGAAAATGACAAAGGTGCTGATAGGAATAGAGAACAGGGTCGTGGTGGGCCTGGATTGGCAGCAAATATTGACTCTCAGAAGCAAGTAGCTGGGCCAGTTGTCCATGGGGAAGCTGCTCACCATCAGCCTATTGGTCTTCATATTGCTATAACAGCTGCAACTGTCATGGCAGCAGCTCTAGGAGGTGCTCAATCTGGCATCCAGCCAAATCAAAATGGCTTGCAGAGTCAGTCAGGATTGGCACATGACCCTTTGACTCTGCATATGGCCAAACTGTCCAGGAGTCAGCTGAATGAGATTATGTCTGAGCTTAAGGCAATGGCTACACAGAACAAGGAACTGGCTCGCCAGTTGTTGCTTTCCAGACCACAATTACCAAAGGCACTTTTTCAGGCACAGGTAATGCTAGGAATGGTGACCCCACAAGTGTTACAAATGCCAAACCTTAAGCAAGTTGCAAGTGAAACCTCACAGCCTCCAGTGGATGAAAGCCAGCTAGGTCAGCCGGCAGTGTTTCAAACACTATCTGGGCTACCTTCAAATGCACAGATCAAGTTGCAGTCTGGCTTGATGCCCAGTATTCAAGAAGCTCAAGTCAGTGGCTTGCATTATAATTCTTTGGTTCCTAATCCATTAGCTGCACACCCAAAGCCTCCTTTGCAGCCTCGAATGCAGCTTCCACAACATCCAAGCAACCCTGTCGTGCAGCTGGGCACATTATCAGGGCATTCTAGCTCATCACTTCCTGCTGTGCGCCCCCAGTCTTTATTCAGTTTGCCTGTTAGACCACCAAATCAGCCCAGTTTGTCAATTGGACCACCAATTCAGCTGGCAACTTCAACTTCTATGAATCAACAAATGCATTTGCTCCAACATTCGGGGCAGATTGGTAACTCTAGTGTAGGACAAAATATTCGGATGGTTCGTCCAGATGCAAGCTTTCAGGCTGGGCTGTCCATATCATCAGGTATTTCTCAGGCAGTTGGTAGGGAAGCTGACAGCTCAGCGAAAGTTCGTGAGGATTCTAATTGGACCAAGAAAAGTAGTACATATTCAAATATTCCTCGTGGATCAGGAGAGAAACCAAATGCATTTAATGAGTCTTCAGAACCATTTAATCGCCCTTCAAAACTGATTAAATTGGATGATGGAAGGAGTTCGTCTCTCTCTGCAGGAGTCACAAGTGTGCCTGTTTCCAAGGGATCTTCTCAAGTTCCTGGTGGTGGTTCATTGCTTGTAAATGCAACTTCTAAATCAGAAGTGCGATACCCTGAGCAACAAGCCTCTCAGTCTCAGCTTCCACCTGATGTGGAATCGATTTTACTGCAACAAGTTATGAGTCTAACACCGGAGCAATTGAGTTCCTTGCCACATGAGCAGCAACAGCAGGTTATTCAGCTTCAGCAGGCTCTTCGGCGAGACCAGATCCAGCCCTCATAG 1689 0.4654 MATSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLAANIDSQKQVAGPVVHGEAAHHQPIGLHIAITAATVMAAALGGAQSGIQPNQNGLQSQSGLAHDPLTLHMAKLSRSQLNEIMSELKAMATQNKELARQLLLSRPQLPKALFQAQVMLGMVTPQVLQMPNLKQVASETSQPPVDESQLGQPAVFQTLSGLPSNAQIKLQSGLMPSIQEAQVSGLHYNSLVPNPLAAHPKPPLQPRMQLPQHPSNPVVQLGTLSGHSSSSLPAVRPQSLFSLPVRPPNQPSLSIGPPIQLATSTSMNQQMHLLQHSGQIGNSSVGQNIRMVRPDASFQAGLSISSGISQAVGREADSSAKVREDSNWTKKSSTYSNIPRGSGEKPNAFNESSEPFNRPSKLIKLDDGRSSSLSAGVTSVPVSKGSSQVPGGGSLLVNATSKSEVRYPEQQASQSQLPPDVESILLQQVMSLTPEQLSSLPHEQQQQVIQLQQALRRDQIQPS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph2g2174 562 SUPERFAMILY RNA-binding domain, RBD 4 101 IPR035979 GO:0003676
Enph2g2174 562 MobiDBLite consensus disorder prediction 293 314 - -
Enph2g2174 562 MobiDBLite consensus disorder prediction 470 495 - -
Enph2g2174 562 Pfam Transcription termination and cleavage factor C-terminal 524 556 IPR026896 GO:0031124
Enph2g2174 562 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Enph2g2174 562 SMART rrm1_1 8 81 IPR000504 GO:0003723
Enph2g2174 562 MobiDBLite consensus disorder prediction 83 105 - -
Enph2g2174 562 Gene3D - 517 560 IPR038192 -
Enph2g2174 562 Gene3D - 152 230 - -
Enph2g2174 562 FunFam Cleavage stimulating factor 64 155 230 - -
Enph2g2174 562 PANTHER CLEAVAGE STIMULATION FACTOR SUBUNIT 2 3 558 - -
Enph2g2174 562 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 79 IPR000504 GO:0003723
Enph2g2174 562 Coils Coil 180 200 - -
Enph2g2174 562 MobiDBLite consensus disorder prediction 428 456 - -
Enph2g2174 562 Gene3D - 1 112 IPR012677 -
Enph2g2174 562 MobiDBLite consensus disorder prediction 410 495 - -
Enph2g2174 562 CDD RRM_CSTF2_RNA15_like 7 83 - -
Enph2g2174 562 MobiDBLite consensus disorder prediction 295 309 - -
Enph2g2174 562 FunFam Cleavage stimulating factor 64 1 116 - -
Enph2g2174 562 Pfam Hinge domain of cleavage stimulation factor subunit 2 156 228 IPR025742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph2g2174 Enph-Chr2 35369641 35379129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph2g2174 9 82 Eukaryotic Initiation Factors Gene Family AT2G23350 31.081 1.50e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph2g2174 K14407 - gmx:100806489 700.279