LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph2g1949	ATGTCATATTTATTTGACCGATATGGATATGTGCCACGTGGTCATCTACACACCATTGCTTTATCTTTCAGTGTGGCATGGTCGGTTCAATACCAGCATCTTCTTCTTCTTCTCCTTCCTCCTTCCTCCTTTTCCTTTTCTACGGCTCAACTTGTTCATCATCAAGTTTATTCTACGCCATCAGTTCTTAATCAGAGAGCTTCGTGGAAGAGAAATTTGGCGAACGAAGACGAAAGGGATAGCGAAATTCTGCATTGGGAAAGCAACAATGAGAGACATAAGATGAATAACATTAGAACACCAAAAGAATTATCAGATTCCTCATTGAAACAGGAAAATCATGACAAAGCGAAGGCTTCAACTTCATCAAGCAGCTCAACAGCACAATGGTTAAGACTTAAGGATCCGAGGATTGTTCGAGTTTCGCGAGCCTTTGGAGGGAAAGATCGTCATAGCAAGGTGTGCACCGTGAGAGGATTGAGGGATAGACGAGTAAGGCTTTCAGTACCTACAGCTATTCAGCTATATGATCTTCAAGATAGGTTAGGGTTCAATCAGCCCAGTAAGGTTGTGGATTGGTTGCTCAATGCAGCTAAGCATGAAATTGATGAACTCCCACCACTGCAAATTCCACCAGGAAGCTTCAGTTTCTGTCATCAATCATCTGCAATAACTTCTAATAACAATGAAGTTACTACTTCTCAGCCAAATGAACAAGGGTTTAACATCAATGAGAGTGTTCATCACTTAGAAGATTCAAACTCAACCATGTCAAAGTCAAAAGTTTCAGGAGAAGTGGTCACTGAGAAAGCAAATTGGAATAGAAGGGAAGAAGATAGAGGCAATATGTTATCAAGAGCATATCATCATCTCCCTCATCATCATCATCATCCTTCTTTTATGGGTTTATTGAACACTATGCCACTTGGTTATAATGTTTGTAACCAATGGGAGGCGAATAATTCAAGCGATGCTTCTCACTCAGAAAACCTTGCTGGATTTGCAAACCAGACAGATTTGCAACACAGCATCAACGTTCTACCTTTCTCACCATTATCATCATCCTTGTCTTTATCAACTGGAGCAACTCAGCCATATTTCCCTTCACATATTGGAGCATTGGACATGGATCCAAGGCAGATCAATCAATATCATCAGATGTTGAGTTCTTCAAATTCTCTGATGAGCCCTTCTGTTCACACCACAAGCCAATCTGTGAAGCCATTCAGCTTGAGTATGATGAATATGACTCCAAAACTTCTTCATCCGCCAAATAGCATTGAAGGTCAGTCCCGTAATAGAGACCAGGGCTTTCCTTCCAATCTGAATCTGTGTCATGAGAAAAAGCTATCGAATCTGTATTCTGCTACAGTACTGCCAATGCGTTTTTCAATGGGAAGAGACGATATCCCTCAAGGCTTAATGATTTGCTCATCTGAGATTGTCGATACTAACGGTGGTATTTAG	1467	0.409	MSYLFDRYGYVPRGHLHTIALSFSVAWSVQYQHLLLLLLPPSSFSFSTAQLVHHQVYSTPSVLNQRASWKRNLANEDERDSEILHWESNNERHKMNNIRTPKELSDSSLKQENHDKAKASTSSSSSTAQWLRLKDPRIVRVSRAFGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGFNQPSKVVDWLLNAAKHEIDELPPLQIPPGSFSFCHQSSAITSNNNEVTTSQPNEQGFNINESVHHLEDSNSTMSKSKVSGEVVTEKANWNRREEDRGNMLSRAYHHLPHHHHHPSFMGLLNTMPLGYNVCNQWEANNSSDASHSENLAGFANQTDLQHSINVLPFSPLSSSLSLSTGATQPYFPSHIGALDMDPRQINQYHQMLSSSNSLMSPSVHTTSQSVKPFSLSMMNMTPKLLHPPNSIEGQSRNRDQGFPSNLNLCHEKKLSNLYSATVLPMRFSMGRDDIPQGLMICSSEIVDTNGGI	488

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Enph2g1949	488	ProSiteProfiles	TCP domain profile.	147	205	IPR017887	-
Enph2g1949	488	PANTHER	TRANSCRIPTION FACTOR TCP4-RELATED	108	390	IPR005333	GO:0003700
Enph2g1949	488	MobiDBLite	consensus disorder prediction	85	117	-	-
Enph2g1949	488	MobiDBLite	consensus disorder prediction	85	128	-	-
Enph2g1949	488	Pfam	TCP family transcription factor	147	280	IPR017887	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph2g1949	Enph-Chr2	21001102	21003514	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph2g1949	83	248	TCP Transcription Factor Family	AT3G02150	55.172	1.00e-48	169

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TCP	Enph2g1949		TCP	1.3e-31	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph2g1949	-		-	var:108327895	315.849

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