Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph2g1889 ATGGATGTAGATGGGGGAAATAAGCGCGTCTTTCAGCGTCTCCGTGGGCCTCCGGCTGATACCAAGCACCAGAAAGTTTGCTACCATTGGTTGGCAGGCAGGTGCAATAGACATCCGTGCCCGTTTCTACACAGTGAATCACCTCCCCTCAACGCTAATGGGATGTCTTCGAAAAGAGCCCATGGGTCTGCTGATGATTCAGGGTTTTCAGGTCCACGGAGGAATCCGAATTTTAGTGGAGCTTCAACGTGGGGCGGGGTTCATGGTGGTGGAGGACTTGCAGCTGGTAATAAAATATTTAGGAAGGCTGAAAAGCTTTGTACTTATTGGATTCAGGGGAATTGTAATTATGGAGACCGGTGTAAGTTCCTTCACTCTTGGAGTGTAGGAGATGGTTTCTCCTTACTGACACAACTTGAAGGGCATCAGAAGGTTGTGACTGGAATATCTCTGCCATCTGGTTCGGATAAGCTGTATACTGGAAGCAAAGATGAGACAGTAAGGCTTTGGGACTGCCAGTCTGGTCAGTGTTTGGCTGTGATTAATCTTGGTTGTGAAGTGGGTTGTGTTATCAGTGAAGGTCCTTGGCTTTTTGTTGGTGTACCTAATTATGTTAAGGCATGGAACACTCAAACATCAACAGAACTAAGTCTGAGTGGCCCTGCTGGACAAGTTTATGCATTGGCTGTGGGTAACAATATGCTTTTTGCTGGTATGCAGGGAAATGTGACATGTAATGTACTCCTTAGAAAGTTTATTAATTCAGTTGTTGGTAAATTTGTAACTGATATGATAAATGAATTACTTTTCTTGCAGGATGGGTCCATATTAGCATGGAAGTTCAATGCATCTACTAACACCTTTGAGCCTGTTACATCACTTAATGGTCATTCCCTTGCTGTTGTTTCATTTGTTGTTGGAGCAAATAGGCTATACTCTGGCTCAATGGACAAGACAATAAGAGTTTGGAACCTTGAGACATTGCAGTGTTTACAGACTTTATCAGGGCATGCATCAGTTGTGATGTCTGTTCTTTGCTGGGATCAGTTTCTTTTATCTGGTTCATTAGACAAAACAGTAAAGGTTTGGGTAGCTACAGAAAGTGGAAACTTGGAAGTGACTTATACCCACAATGAGGAACATGGTGTACTTAAACTTTGTGGGATGCATGATTCACAAGGCAAGCCCATTTTGCTGTGCTCTTGCAATGATAATACCATGCACCTCTATGATCTACCATCGTTCACAGAGAGAGGTAAAGTTTTCACAAAGCAAGAGGTTCGAGCTATTGAGGTTGGTCCTGGAGGCTTATTCTTCACTGGTGATGGAACTGGCCAAGTGAGAGTCTGGAATTGGTTGACCGAGCCAACTACTTCTGTCCAATAA 1386 0.4365 MDVDGGNKRVFQRLRGPPADTKHQKVCYHWLAGRCNRHPCPFLHSESPPLNANGMSSKRAHGSADDSGFSGPRRNPNFSGASTWGGVHGGGGLAAGNKIFRKAEKLCTYWIQGNCNYGDRCKFLHSWSVGDGFSLLTQLEGHQKVVTGISLPSGSDKLYTGSKDETVRLWDCQSGQCLAVINLGCEVGCVISEGPWLFVGVPNYVKAWNTQTSTELSLSGPAGQVYALAVGNNMLFAGMQGNVTCNVLLRKFINSVVGKFVTDMINELLFLQDGSILAWKFNASTNTFEPVTSLNGHSLAVVSFVVGANRLYSGSMDKTIRVWNLETLQCLQTLSGHASVVMSVLCWDQFLLSGSLDKTVKVWVATESGNLEVTYTHNEEHGVLKLCGMHDSQGKPILLCSCNDNTMHLYDLPSFTERGKVFTKQEVRAIEVGPGGLFFTGDGTGQVRVWNWLTEPTTSVQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph2g1889 461 SMART c3hfinal6 23 46 IPR000571 GO:0046872
Enph2g1889 461 SMART c3hfinal6 103 127 IPR000571 GO:0046872
Enph2g1889 461 PANTHER - 69 457 IPR044715 -
Enph2g1889 461 MobiDBLite consensus disorder prediction 51 83 - -
Enph2g1889 461 ProSiteProfiles Zinc finger C3H1-type profile. 21 47 IPR000571 GO:0046872
Enph2g1889 461 Pfam WD domain, G-beta repeat 135 171 IPR001680 GO:0005515
Enph2g1889 461 Pfam WD domain, G-beta repeat 289 324 IPR001680 GO:0005515
Enph2g1889 461 Pfam WD domain, G-beta repeat 329 363 IPR001680 GO:0005515
Enph2g1889 461 PRINTS G protein beta WD-40 repeat signature 158 172 IPR020472 -
Enph2g1889 461 PRINTS G protein beta WD-40 repeat signature 351 365 IPR020472 -
Enph2g1889 461 PRINTS G protein beta WD-40 repeat signature 311 325 IPR020472 -
Enph2g1889 461 ProSitePatterns Trp-Asp (WD) repeats signature. 311 325 IPR019775 -
Enph2g1889 461 ProSiteProfiles Trp-Asp (WD) repeats profile. 139 180 IPR001680 GO:0005515
Enph2g1889 461 FunFam Zinc finger CCCH domain-containing protein 48 127 217 - -
Enph2g1889 461 SUPERFAMILY WD40 repeat-like 118 452 IPR036322 GO:0005515
Enph2g1889 461 Pfam CCCH-type zinc finger 105 125 IPR041367 -
Enph2g1889 461 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 139 171 - -
Enph2g1889 461 ProSiteProfiles Trp-Asp (WD) repeats profile. 334 363 IPR001680 GO:0005515
Enph2g1889 461 Gene3D - 127 245 IPR015943 GO:0005515
Enph2g1889 461 Gene3D - 262 460 IPR015943 GO:0005515
Enph2g1889 461 SMART WD40_4 327 364 IPR001680 GO:0005515
Enph2g1889 461 SMART WD40_4 368 411 IPR001680 GO:0005515
Enph2g1889 461 SMART WD40_4 132 171 IPR001680 GO:0005515
Enph2g1889 461 SMART WD40_4 414 451 IPR001680 GO:0005515
Enph2g1889 461 SMART WD40_4 287 324 IPR001680 GO:0005515
Enph2g1889 461 ProSiteProfiles Trp-Asp (WD) repeats profile. 294 333 IPR001680 GO:0005515
Enph2g1889 461 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 294 327 - -
Enph2g1889 461 ProSiteProfiles Zinc finger C3H1-type profile. 101 128 IPR000571 GO:0046872
Enph2g1889 461 FunFam Zinc finger CCCH domain-containing protein 48 254 459 - -
Enph2g1889 461 Gene3D - 8 59 - -
Enph2g1889 461 Gene3D - 97 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph2g1889 Enph-Chr2 18812358 18819213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph2g1889 283 451 U-box Gene Family AT2G33340 27.174 3.24e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Enph2g1889 WD40 9.2e-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph2g1889 - - qsa:O6P43_008277 697.582