Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph2g1119 ATGGCGAATACTGCGACGGTCGCCGCCACCCCTGCTTCGCTTTACGTCGGCGATCTCCACCCTGACATTACCGATGGTAAGCTGTTTGAAATATTTTCCGAGTTCAAGAGCCTTACTTCTGTTCGGGTATGTAGGGACTCCTCCACTGGAAGGTCTCTCTGTTACGGCTACGTCAACTTCGTCTCTCCTCAAGATGCATTTCGTGCTATTGAGGTGAAGAATCATTCTATACTGAATGGAAAAGCAATAAGGATCATGTGGTCAAATCGTGATCCTGATGCAACTAAAAGCGGCATAGGAAATGTTTTTGTTAAGCTCAATGGCTCTACTGTTAAAGACAAACAGATCTATGTTGGAAAGTTTGTCAAAAAGAGTGACCGCATTTTGCCTAATCCTGATGCCAAATATACAAATTTGTATGTCAAGAATTTGGACCCCAAAATTACAGAAGAGCTTCTACAAGAAAAGTTCCTATCTTTTGGAAAAATTGTCAGCCTAGTTATTGTGAAGGACGACAATGGTATTTCCAAGGGCTTTGGCTTCGTGAATTTTGATAACCCTGATGATGCTAGACGAGCAATGGAAGGAATGAATGGATCACAACTTGGTTCAAAGATTCTATATGTAGCCAGGGCACAAAAGAAGGCCGAGCGAGAGCTTATTTTGCACCATCAATTTGAGGAGAAACGCAAGGAACAAATCTTAAAATATAAGGTATCAAATGTTTATGTGAAGAACATTGATGATGATATAAGTGATGAAGAACTACGGGATCTTTTTCGTGCATGTGGCTCAATAACATCAGCAGTAGTTATGCGAGATGGTAAAGGTATAAGCAAGGGGTTCGGTTTCGTCTGCTTCTCTACTCCTGAGGAGGCCAATAAAGCTGTGAACACTTTTCACGGATATATGTTTCATCGCAAACCATTATATGTTGCTATTGCTCAAAGGAAGGAGGATAGGCAAGCACAATTGCAGATTCAGCATGCGCAGCGAATGGCAGGACTAACTGGACCTTCAATAGCTGTTATTCCTGGTGGATATTCTCCTTACTATTATGCAGCTCCGGGAGCTGTTTCACAGGTGCCTTCTCGACCTGGGCTAATGTATCAACCTTTGGGGTTGACGCAAGGATGGAGGGGTAATAGCTTTGCACCTCCTACCAGACCATTTCAGCAGTCACTAGTTCCTATGGTTTCTAATTCTACTAGGCAAAACAGGCAAAACAGGGGCAGGATTAATGGGCAAACGATTTCACAGGGAAATGCTCACTCGGGTTCACATATGCCTCAACTGCGTCAACCTTTTCAGTCAGTGACCTCTTCAAAGGAATCAAGTTCACAGCAGCGAGCTGGACAGACAAAGTATGTTCCTAGTGGGCGCCAGCCAGAAATGGAAAAAGCATCGGGAGTTTCATCTGGTGGTAGCTCTACTGTAGGATCTCCGGGAACAGAAATGCTGCATAGCATGCTTGCTGCTGCTACTCTGGAGCAGCAAAAACAGATACTCGGCGAGCATCTGTACCCTCTAGTCCATAAACTCAAGCCTGGCTTAGCAGCGAAGATTACAGGGATGCTTTTGGAGATGGATAATGGAGAATTACTTCTTCTCCTGGAGTCTCCAGAGTCTCTTACTGCCAAGGTGGAAGAAGCTGTGCAGGTGCTCAAGAACTCTAAGACTAAAGTTTCTGGCCAGGATGTACTTCATCCAAATTTCCTTTCAGCCGAAGTTGCGGTGAACTGA 1743 0.4429 MANTATVAATPASLYVGDLHPDITDGKLFEIFSEFKSLTSVRVCRDSSTGRSLCYGYVNFVSPQDAFRAIEVKNHSILNGKAIRIMWSNRDPDATKSGIGNVFVKLNGSTVKDKQIYVGKFVKKSDRILPNPDAKYTNLYVKNLDPKITEELLQEKFLSFGKIVSLVIVKDDNGISKGFGFVNFDNPDDARRAMEGMNGSQLGSKILYVARAQKKAERELILHHQFEEKRKEQILKYKVSNVYVKNIDDDISDEELRDLFRACGSITSAVVMRDGKGISKGFGFVCFSTPEEANKAVNTFHGYMFHRKPLYVAIAQRKEDRQAQLQIQHAQRMAGLTGPSIAVIPGGYSPYYYAAPGAVSQVPSRPGLMYQPLGLTQGWRGNSFAPPTRPFQQSLVPMVSNSTRQNRQNRGRINGQTISQGNAHSGSHMPQLRQPFQSVTSSKESSSQQRAGQTKYVPSGRQPEMEKASGVSSGGSSTVGSPGTEMLHSMLAAATLEQQKQILGEHLYPLVHKLKPGLAAKITGMLLEMDNGELLLLLESPESLTAKVEEAVQVLKNSKTKVSGQDVLHPNFLSAEVAVN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph2g1119 580 SUPERFAMILY RNA-binding domain, RBD 128 218 IPR035979 GO:0003676
Enph2g1119 580 MobiDBLite consensus disorder prediction 402 484 - -
Enph2g1119 580 FunFam Polyadenylate-binding protein 223 331 - -
Enph2g1119 580 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 84 IPR000504 GO:0003723
Enph2g1119 580 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 139 206 IPR000504 GO:0003723
Enph2g1119 580 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 242 310 IPR000504 GO:0003723
Enph2g1119 580 MobiDBLite consensus disorder prediction 469 484 - -
Enph2g1119 580 FunFam Polyadenylate-binding protein 128 222 - -
Enph2g1119 580 Pfam Poly-adenylate binding protein, unique domain 490 555 IPR002004 GO:0003723
Enph2g1119 580 FunFam Polyadenylate-binding protein 481 567 - -
Enph2g1119 580 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 90 IPR000504 GO:0003723
Enph2g1119 580 SUPERFAMILY PABC (PABP) domain 487 566 IPR036053 GO:0003723
Enph2g1119 580 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 240 317 IPR000504 GO:0003723
Enph2g1119 580 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 483 560 IPR002004 GO:0003723
Enph2g1119 580 SMART poly_2 495 558 IPR002004 GO:0003723
Enph2g1119 580 Gene3D - 222 331 IPR012677 -
Enph2g1119 580 SMART rrm1_1 138 210 IPR000504 GO:0003723
Enph2g1119 580 SMART rrm1_1 241 313 IPR000504 GO:0003723
Enph2g1119 580 SMART rrm1_1 13 86 IPR000504 GO:0003723
Enph2g1119 580 FunFam Polyadenylate-binding protein 4 99 - -
Enph2g1119 580 SUPERFAMILY RNA-binding domain, RBD 12 125 IPR035979 GO:0003676
Enph2g1119 580 Gene3D - 482 570 - -
Enph2g1119 580 CDD RRM4_I_PABPs 240 317 - -
Enph2g1119 580 Gene3D - 112 220 IPR012677 -
Enph2g1119 580 Gene3D - 2 97 IPR012677 -
Enph2g1119 580 MobiDBLite consensus disorder prediction 402 456 - -
Enph2g1119 580 SUPERFAMILY RNA-binding domain, RBD 237 335 IPR035979 GO:0003676
Enph2g1119 580 PANTHER RNA BINDING PROTEIN 12 89 - -
Enph2g1119 580 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 137 214 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph2g1119 Enph-Chr2 9259603 9264679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph2g1119 12 578 Eukaryotic Initiation Factors Gene Family AT2G36660 47.917 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph2g1119 K13126 - gmx:100779547 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph2g1119 2 9259603 9264679 Enph2g1119 2 9259603 9264679 ECH