Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enph2g1001 | ATGGACAACGACGTCGCTCTTGCTCTCAGGAAAGCGAAGCTCCTCAAGGTCAAATTGGAGGCACTGGAGCGATCCAACTCCGCCAACCGTAGCCTTCCTGACTGCGGCCCTGGGTCGTCGTCGGACAGGACTCGGACGTCCGTGGTCAGTAGTTTGAAGAAGAAGCTGAAGGACTCCATGGACAGTTTCAATGAACTCAGGCAACATATCTCAGCCGAATACCGAGAGACCGTACAGCGCAGGTATTTCACGGTCACCGGCGAGAATCCCGACGAGCAGACCATCGACCTCTTGATCTCTACAGGTGAGAGTGAGACGTTCCTTCAGAAAGCCATCCAAGAGCAAGGAAGAGGAAGAATTCTGGACACCATCAATGAAATTCAAGAGAGGCACGATGCCGTGAAAGATTTGGAGAAGAATCTGCTGGAGTTGCATCAGGTGTTCCTGGACATGGCAGTGCTGGTGCAATCACAAGGGGAACAATTGGATGATATTGAGAGCCACGTGGCGAAAGCGAGCTCGTTTGTGAAGAGGGGATCCGAGCAGTTACAGACAGCAAGGAAGCACCAGAAAAACACCAGGAAATGGACCTGTTATGCCATTACGCTTCTGCTTGTGATTATCTTGATCGTGGTGCTCTTCACTGTGAAGCCATGGCAAAATAGTGGTGGTAGTTCTCCAGCATCACCTCAAACACCTGCATCACCACCACCACCACCTCCTTCAACAGCTTAA | 735 | 0.5129 | MDNDVALALRKAKLLKVKLEALERSNSANRSLPDCGPGSSSDRTRTSVVSSLKKKLKDSMDSFNELRQHISAEYRETVQRRYFTVTGENPDEQTIDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKDLEKNLLELHQVFLDMAVLVQSQGEQLDDIESHVAKASSFVKRGSEQLQTARKHQKNTRKWTCYAITLLLVIILIVVLFTVKPWQNSGGSSPASPQTPASPPPPPPSTA | 244 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enph2g1001 | 244 | MobiDBLite | consensus disorder prediction | 221 | 244 | - | - | |
| Enph2g1001 | 244 | PANTHER | SYNTAXIN | 6 | 211 | IPR045242 | - | |
| Enph2g1001 | 244 | MobiDBLite | consensus disorder prediction | 230 | 244 | - | - | |
| Enph2g1001 | 244 | Coils | Coil | 5 | 25 | - | - | |
| Enph2g1001 | 244 | Gene3D | - | 120 | 217 | - | - | |
| Enph2g1001 | 244 | CDD | SynN | 1 | 111 | IPR006011 | GO:0016020 | |
| Enph2g1001 | 244 | MobiDBLite | consensus disorder prediction | 26 | 47 | - | - | |
| Enph2g1001 | 244 | ProSitePatterns | Syntaxin / epimorphin family signature. | 130 | 169 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
| Enph2g1001 | 244 | Gene3D | - | 1 | 84 | - | - | |
| Enph2g1001 | 244 | CDD | SNARE_syntaxin1-like | 123 | 185 | - | - | |
| Enph2g1001 | 244 | Pfam | SNARE domain | 160 | 212 | IPR000727 | - | |
| Enph2g1001 | 244 | Pfam | Syntaxin | 1 | 159 | IPR006011 | GO:0016020 | |
| Enph2g1001 | 244 | SUPERFAMILY | t-snare proteins | 6 | 179 | IPR010989 | GO:0016020|GO:0016192 | |
| Enph2g1001 | 244 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 124 | 186 | IPR000727 | - | |
| Enph2g1001 | 244 | SMART | tSNARE_6 | 119 | 186 | IPR000727 | - | |
| Enph2g1001 | 244 | FunFam | Syntaxin 132 | 117 | 217 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Enph2g1001 | Enph-Chr2 | 8117832 | 8119911 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Enph2g1001 | 1 | 241 | SNARE and Associated Proteins | AT3G11820 | 71.888 | 2.12e-122 | 349 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enph2g1001 | K08486 | - | gmx:100809258 | 347.821 |