Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph2g0260 CATCTTCTTTGCCTATCCATATGTTCATTTATACCGTTTCACTTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAGAGCATCCATTTCAAAGTTGGGACACCATCTCTGCCTCCCCTCCGTCCCCTCATTCTCCTCCACTTTCTTTTAATTCTCTCACTCCATCTCCATCTGGTAAACTTTCCATAGTGAAAATGTCATCCTCAAGACCTAGCCAGTCATCCAGCAACTCAGGAAGATCAAGACACACTGCTCGAGTTATTGCTCAGACCACTGTAGATGCAAAACTCCATGCAAATTTTGAGGAGTCTGGTAGCTCTTTTGACTACTCAAGTTCAGTGCGTGTCTCTGGTACAGTAAATGTAGAGCAGCAACCAAGATCTGACCGGGTGACAACAGCTTACCTCCACCACATACAGAAAGGCAAGTTGATCCAGCCTTTTGGATGCTTGCTAGCTTTAGATGAGAAAACATGCAAGATGATCGCATACAGTGAGAATGCTCCTGAAATGTTGACCATGGTTAGTCATGCTGTCCCTAGTGTGGGTGACAACCCTGCCCTTGGCATTGGCACAGACATAAGAACCATTTTCACAGCCCCAAGTGCTTCTGCCTTGCAGAAGGCATTAGGATTTGGGGAAGTTTCACTTCTTAACCCCATTTTAGTTCATTGCAAGACCTCTGGGAAGCCCTTTTATGCAATTATTCATCGTGTGACGGGAAGTTTGATTATTGATTTTGAGCCAGTCAAACCTTTTGAAGTTCCTATGACTGCAGCTGGTGCCCTTCAATCCTATAAGCTTGCTGCCAAAGCAATCACCAGATTGCAATCCTTGCCTAGTGGGAGTATGGAAAGGCTATGTGATACAATGGTTCAAGAGGTTTTTGAACTCACTGGTTATGACAGGGTTATGGCTTACAAATTTCATGAGGATGATCATGGGGAAGTGATTGCTGAGATCACAAAGCCAGGTTTAGAGCCTTATCTGGGTTTGCATTACCCGGCCACTGATATTCCACAGGCTGCACGTTTTTTATTTATGAAGAACAAGGTACGAATGATAGTAGATTGTCATGCAAAACATGTGAAGGTGCTTCAAGATGAAAAACTTCCATTTGAGTTAACCTTGTGTGGTTCTACCTTGAGGGCCCCTCATAAATACCAGATTGTTGAGAAAAACATCTTGCGCACCCAGACACTGTTATGTGATATGCTGATGCGCGATGCACCCCTAGGTATTGTATCACAAAGCCCAAATATAATGGATCTTGTGAAATGTGATGGGGCTGCCCTCTTGTATAAAAACAAGGTATGGAGAATAGGAGTAACACCCAGTGAATCCCTGATACGAGAGATATCTGTGTGGCTCTTTGATAACCATATGGATTCCACAGGATTAAGTACTGATAGCTTGTCTGAAGCAGGGTTCCCAGGTGCTCTTGCTCTAGGTGATATAGTATGTGGAATGGCAGCTGTGAGAATATCTTCGAAAGATATGGTTTTCTGGTTTCGCACACATACTGCTGCCAAAATCCGATGGGGTGGTGCTAAGCATGAACCTGGCGAGCAGGATGATAATAGAAGGATGCATCCAAGATCATCATTTAAAGCTTTCCTTGAGGTTGTGAAGTCAAGGAGCTTACCGTGGAAGGACTATGAAATGGATGCTATCCATTCCTTGCAGCTAATCCTGAGGAATGCATTTAAAGATTCAGAGAGTATGGATATAAACAACAATGCAATTAACACAAGATTGAGTGATTTAAAAATTGAAGGGATGCAGGAATTGGAGGCAGTGACTAGTGAGATGGTTCGATTGATTGAAACAGCAACAGTGCCTATTTTGGCAGTTGATGTTGATGGGCTGGTCAATGGGTGGAATACAAAAATTGCTGCGTTGACAGGTCTTCCAGTTGATGAAGCAATCGGGAAGCATTTGCTCACACTAGTTGAGGATTCTTCAACTGATAGGGTCAAGAATATGCTGGACATGGCACTGCAAGGTAAAGAAGAGCAGAATGTCCAATTTGAGATCAAAACACATGGATCTAAGATTGATTCTGGTCCTATCAGCTTGGTTGTTAATGCTTGTGCAAGCAGAGACATTCGAGATAATGTGGTGGGGGTTTGTTTTGTGGCCCAAGATATTACTGCTCAGAAGACAGTAATGGACAAATTCACTCGAATTGAAGGTGATTACAAGGCAATTGTACAAAACCCAAACCCATTGATTCCCCCAATATTTGGTACTGATGAATTTGGCTGGTGTTGTGAGTGGAATCCTGCAATGATTAAGTTGACTGGATGGAAGCGAGAAGATGTGATGGACAAAATGCTCTTAGGGGAGGTCTTTGGGACTCATGCTGCTTGTTGCCGTTTAAAGAATCAAGAAGCCTTTGTTAATTTTGGAGTTGTACTTAATAAAGCGATGACAGGTTTGGAAACTGCAAAGGTTGCTTTTGGCTTTTTTTCTCGGAGTGGGAAGTATGTAGAATGCCTGCTTTCTGTGAGTAAAAAGTTGGACATAGAGGGTGCAGTTACAGGGGTTTTCTGCTTCTTGCAGCTGGCTAGTCCAGAGTTGCAACAAGCATTACATATTCAGAGATTATCTGAACAAACTGCCTTGAAGAGATTAAAAGCTCTAACTTACATGAAAAGGCAAATACAGAATCCTTTATGTGGGATTGTGTTTTCCCGGAAAATGTTGGAGGGTACAGAGTTGGGACCTGAACAAAAACAACTTTTATGCACCAGTGCCCTGTGCCAGCGCCAGCTCAGCAAAGTTCTTAATGACTCTGACCTTGACAACATCATTGATGGGTACTTAAATCTGGAGATGGTTGAATTCACTCTGCATGAAGTATTGGTTGCCTCTCTCAGTCAAGTAATGACGAAGAGCAATGCAAAGGGTATTAGAATAGTGAACGAGGTGACGGAGCAAATCATGAAGGAAACCTTTTATGGTGACAGTCTTAGGCTTCAACAGGTTTTAGCTGACTTCTTATTGATGTCCGTTTCTTTTACACCCTCTGGAGGTAAGGTGGTTGTAGCAGCCTCTGTAACCAAAGATCAGTTGGGACAATCAGTCCATCTCGCCAATTTGGAGCTCAGCATAACACATGCTGGAAGTGGGATTCCGGAAGCATTGCTGAACCAGATGTTTGGAAGTGATGGACAAGAATCTGAGGAGGGTATTAGCCTGTTCATCAGCAGAAAGCTGGTAAAGCTCATGAATGGGGATGTCCGTTATCTGAGGGAAGCCGGCAAATCAGCCTTCATCATAGCTGTTGAACTTGCTACTGCCCATATGTCGAGGGCTTAA 3327 0.4319 HLLCLSICSFIPFHFFVFFFFFFFFFTEHPFQSWDTISASPPSPHSPPLSFNSLTPSPSGKLSIVKMSSSRPSQSSSNSGRSRHTARVIAQTTVDAKLHANFEESGSSFDYSSSVRVSGTVNVEQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTCKMIAYSENAPEMLTMVSHAVPSVGDNPALGIGTDIRTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPFEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVLQDEKLPFELTLCGSTLRAPHKYQIVEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKVWRIGVTPSESLIREISVWLFDNHMDSTGLSTDSLSEAGFPGALALGDIVCGMAAVRISSKDMVFWFRTHTAAKIRWGGAKHEPGEQDDNRRMHPRSSFKAFLEVVKSRSLPWKDYEMDAIHSLQLILRNAFKDSESMDINNNAINTRLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAALTGLPVDEAIGKHLLTLVEDSSTDRVKNMLDMALQGKEEQNVQFEIKTHGSKIDSGPISLVVNACASRDIRDNVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNPAMIKLTGWKREDVMDKMLLGEVFGTHAACCRLKNQEAFVNFGVVLNKAMTGLETAKVAFGFFSRSGKYVECLLSVSKKLDIEGAVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKALTYMKRQIQNPLCGIVFSRKMLEGTELGPEQKQLLCTSALCQRQLSKVLNDSDLDNIIDGYLNLEMVEFTLHEVLVASLSQVMTKSNAKGIRIVNEVTEQIMKETFYGDSLRLQQVLADFLLMSVSFTPSGGKVVVAASVTKDQLGQSVHLANLELSITHAGSGIPEALLNQMFGSDGQESEEGISLFISRKLVKLMNGDVRYLREAGKSAFIIAVELATAHMSRA 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph2g0260 1108 SMART pas_2 603 669 IPR000014 -
Enph2g0260 1108 SMART pas_2 733 802 IPR000014 -
Enph2g0260 1108 Gene3D - 258 391 IPR029016 -
Enph2g0260 1108 SUPERFAMILY GAF domain-like 393 570 - -
Enph2g0260 1108 PANTHER TWO-COMPONENT HISTIDINE KINASE 881 1085 - -
Enph2g0260 1108 Gene3D PAS domain 595 732 - -
Enph2g0260 1108 SMART HKATPase_4 990 1102 IPR003594 -
Enph2g0260 1108 CDD PAS 745 856 IPR000014 -
Enph2g0260 1108 NCBIfam PAS domain S-box protein 608 724 IPR000014 -
Enph2g0260 1108 MobiDBLite consensus disorder prediction 56 86 - -
Enph2g0260 1108 Pfam PAS fold 135 251 IPR013654 GO:0006355
Enph2g0260 1108 ProSiteProfiles PAC domain profile. 674 730 IPR000700 -
Enph2g0260 1108 SUPERFAMILY PYP-like sensor domain (PAS domain) 140 252 IPR035965 -
Enph2g0260 1108 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 990 1098 IPR003594 -
Enph2g0260 1108 Gene3D PAS domain 126 250 - -
Enph2g0260 1108 Pfam GAF domain 284 387 IPR003018 GO:0005515
Enph2g0260 1108 CDD HATPase_Phy-like 989 1100 IPR044767 -
Enph2g0260 1108 ProSiteProfiles Histidine kinase domain profile. 885 1102 IPR005467 -
Enph2g0260 1108 ProSiteProfiles PAS repeat profile. 601 671 IPR000014 -
Enph2g0260 1108 PIRSF Phytochrome_conventional 388 1108 IPR012129 GO:0006355|GO:0009585|GO:0009881|GO:0017006|GO:0042803
Enph2g0260 1108 PIRSF Phytochrome_conventional 65 389 IPR012129 GO:0006355|GO:0009585|GO:0009881|GO:0017006|GO:0042803
Enph2g0260 1108 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 940 1094 IPR036890 -
Enph2g0260 1108 Gene3D - 392 575 IPR043150 -
Enph2g0260 1108 PRINTS Phytochrome signature 716 736 IPR001294 GO:0006355|GO:0009584
Enph2g0260 1108 PRINTS Phytochrome signature 696 713 IPR001294 GO:0006355|GO:0009584
Enph2g0260 1108 PRINTS Phytochrome signature 199 221 IPR001294 GO:0006355|GO:0009584
Enph2g0260 1108 Pfam Phytochrome region 398 573 IPR013515 GO:0006355|GO:0009584
Enph2g0260 1108 FunFam Phytochrome 390 521 - -
Enph2g0260 1108 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 284 387 IPR016132 -
Enph2g0260 1108 Gene3D PAS domain 747 859 - -
Enph2g0260 1108 SUPERFAMILY PYP-like sensor domain (PAS domain) 607 714 IPR035965 -
Enph2g0260 1108 SUPERFAMILY PYP-like sensor domain (PAS domain) 748 854 IPR035965 -
Enph2g0260 1108 SUPERFAMILY GAF domain-like 264 390 - -
Enph2g0260 1108 FunFam Phytochrome 597 728 - -
Enph2g0260 1108 Gene3D - 941 1105 IPR036890 -
Enph2g0260 1108 ProSiteProfiles PAS repeat profile. 734 786 IPR000014 -
Enph2g0260 1108 Pfam PAS fold 604 718 IPR013767 GO:0006355
Enph2g0260 1108 Pfam PAS fold 734 856 IPR013767 GO:0006355
Enph2g0260 1108 CDD PAS 612 718 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph2g0260 Enph-Chr2 1989416 1997266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph2g0260 67 387 Histidine Kinase Gene Family AT1G09570 87.539 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph2g0260 K12120 - gmx:100790763 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph2g0260 2 1989416 1997266 Enph4g2038 4 32567445 32574521 CCT
Enph2g0260 2 1989416 1997266 Enph2g0260 2 1989416 1997266 ECH