Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g1954 ATGTGCAGTCGTTCAGAAAGTAAGCTTTCTCCCTCGAACAGCGTCAAGGAAAATGAGCTTCAAAAGCTAAACTTCTGCTACTCTTCGGTTTTGCTTGAACTCTCTGCCTCCGATGATCTTGAAACTTTCAGAAAAGAAGTGGAAGAGAAAGGTTGCGATATCAACGTGACAGGCTTTTGGTATGGTAGAAGAATTGGATCAAAGGAGATGGGATGGGAGAAGAGGACGGTCCTCATGATTGCTTCTTTGTTTGGAAGCACTAGAGTGCTGAAGTATATAATTGGGACAGGCAGGGTTGATGTGAACAAAACCTGTGGTTCTGACAGGGTCACTGCTCTCCACTTTGCTGTTGCTGGTGGCTCTCAATCTTCACTTGAGATTGTTAAGCTCTTGCTTGATGCTGGTGCCAATGCTAATTGTGTTGATGTCAGTGGAAAGGAGCCTGTTAACCTGATTGCCCCTGCCTTCAATTCCTTCTCCAACGCAAGAAGGAAGGTCATAGAGTTACTGCTCAGAGGAGGGGCAGGAGACCAAATCATCAACCGGGAGATGGAGCAACATAAAATTGTAGTTCCCACTTTCTCCTCAAAAGAAGGAACTGAGAAAAAGGAGTATCTTGTTGATGTATCATTGCCTGATATAAACGATGGTATATATGGAACAGATGAATTTAGGATGTACAGTTTCAAGGTGAATCCGTGCTCAAGAGCTTACCCACATGATTGGACCGAGTGCCCATTCGTTCATCCAGGGGAGAATGCAAGGAGGAGGGACCCACGGAAGTATCCTTATAGCTGCGTTCCCTGCCTTGACTTTCGCAAGGGTACCTGCCAGAAGGGAGATGCCTGTGAATATGCACATGGTGTTTTTGAGTCCTGGCTCCATCCTGCTCAATACCGTACAAAGCTTTGCAAGGATGAGATTGGATGCACTAGAAAAGTTTGTTTCTTTGCTCACAAATCCGCAGAGTTGCGCCCAGTGTATGCATCTACCGGGTCTGCTTTACCTTCGCCAAAGTCCTTCTTGGCCAGTGTACATGATATGACATCAATGAGCCCATTAACTCTTAGTTCTTCATCTTTGCCGATGTCAACTGTTTCAGCACTGCCTACGTCTCCAATTGTAGCTTCTTCACCTCCTAATAGTGGAAGCTTGTGGCAGAACAAAGTAAACCCCAACCCAGCATCATTGCAGCTCCCACAGAGCCGGCTGAAGGCTACCTTGAGTGCTAGGGATCTGGATCTGGAAATGGAACTGCTTGGACTAGAAAGTCCCGCTAACCGAAACCACCAGCAGCAAATTATAGAAGATTTAGCTCTAATCTCCTCCCTGTCTCTACAAAACAAAGACTTCGTCAGGATTGGGGATTTAAACCCAAACAAACTCGGTTCCCTTCTAGGATCTGTTGATCATTCTGTATTACCTCAGTTACATGGACTTTCAGTTCAACAACCTTCATCACCTAGCCAATTGCGCTCTCCGTGTGGGCTTCAAATGCGCCAAAACGTGAACCGTCTTAATGTAAGCTATCCAACCAACCTGCCTTCTTCTCCAGTGAGGAAGTCCTCTGCATTTGGGTTTGACTCATCAGCTGCTGCCGCGGCAGCAGTGATGAATTCTAGGTCTTCTGCCTTTGCTAAGAGAGGCCAAAGTTTTGTTGATCGCAATGCTTCAGTAACTCACCATCTAGAACTATCTTCACCTTCCAACCCCTCCGCCCTTTCACACTGGGGTTCTCCAGATGGAAAATTGGATTGGAGCATGAGTGGACACGAGCTGCACAAGCTGAAGAAATCTGCTTCATTTGGGTTCAGGAATAATGGGATGTCTGCCACCTCTATGACCCCATTGGAACGTGGTGAACCAGATGTCTCATGGGTTCATTCGTTGGTTAGAGATGTGTCCTCTGAGAGGTATGATCTGAGTAAAGAGATGCTTCCACTGTGGGTGAAGCAAATGTATATAGAACAGAACCAGATGGTGGCATAA 1989 0.462 MCSRSESKLSPSNSVKENELQKLNFCYSSVLLELSASDDLETFRKEVEEKGCDINVTGFWYGRRIGSKEMGWEKRTVLMIASLFGSTRVLKYIIGTGRVDVNKTCGSDRVTALHFAVAGGSQSSLEIVKLLLDAGANANCVDVSGKEPVNLIAPAFNSFSNARRKVIELLLRGGAGDQIINREMEQHKIVVPTFSSKEGTEKKEYLVDVSLPDINDGIYGTDEFRMYSFKVNPCSRAYPHDWTECPFVHPGENARRRDPRKYPYSCVPCLDFRKGTCQKGDACEYAHGVFESWLHPAQYRTKLCKDEIGCTRKVCFFAHKSAELRPVYASTGSALPSPKSFLASVHDMTSMSPLTLSSSSLPMSTVSALPTSPIVASSPPNSGSLWQNKVNPNPASLQLPQSRLKATLSARDLDLEMELLGLESPANRNHQQQIIEDLALISSLSLQNKDFVRIGDLNPNKLGSLLGSVDHSVLPQLHGLSVQQPSSPSQLRSPCGLQMRQNVNRLNVSYPTNLPSSPVRKSSAFGFDSSAAAAAAVMNSRSSAFAKRGQSFVDRNASVTHHLELSSPSNPSALSHWGSPDGKLDWSMSGHELHKLKKSASFGFRNNGMSATSMTPLERGEPDVSWVHSLVRDVSSERYDLSKEMLPLWVKQMYIEQNQMVA 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g1954 662 SMART ANK_2a 73 103 IPR002110 GO:0005515
Enph1g1954 662 SMART ANK_2a 108 140 IPR002110 GO:0005515
Enph1g1954 662 Pfam Ankyrin repeats (3 copies) 50 141 IPR002110 GO:0005515
Enph1g1954 662 SUPERFAMILY Ankyrin repeat 27 181 IPR036770 -
Enph1g1954 662 PANTHER UNKEMPT FAMILY MEMBER 33 633 IPR045234 -
Enph1g1954 662 SMART c3hfinal6 263 289 IPR000571 GO:0046872
Enph1g1954 662 Gene3D - 4 186 IPR036770 -
Enph1g1954 662 ProSiteProfiles Ankyrin repeat profile. 108 143 IPR002110 GO:0005515
Enph1g1954 662 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 268 288 IPR000571 GO:0046872
Enph1g1954 662 ProSiteProfiles Ankyrin repeat region circular profile. 108 142 - -
Enph1g1954 662 Gene3D - 265 326 - -
Enph1g1954 662 ProSiteProfiles Zinc finger C3H1-type profile. 263 290 IPR000571 GO:0046872
Enph1g1954 662 FunFam Zinc finger CCCH domain-containing protein 66 221 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g1954 Enph-Chr1 44221141 44224886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph1g1954 29 638 C2H2 Transcription Factor Family AT5G12850 39.970 1.97e-128 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Enph1g1954 Ank_2 1.8e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g1954 - - gmx:100783376 850.121