Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g1900 ATGCTTGGCATAGCTAAAAGATCCACAATTTTTCCTTATTTCTGCCAAGTTTTGCCATATCCAGCTGTCCAGATCATACTTACGTTCAAGCTTGAGTTTGGATTTCCTAACTTTGATTGCTGGTTTTTCAATTGGATGGTGCTTAGTTGGGTTCATCCATTCCATGTTCTTAGGATCAACAAAATGCTTTCATGTGCTGGTGCTGATAGGCTTCAGACGGGGATGAGAGGTGCATTTGGAAAGCCACAAGGCACATGTGCTAGAGTTGCCATTGGGCAGGTACTTCTTTCTGTCCGCTGCAAGGACAGCAACAGCCATCATGCTCAGGAAGCCCTCCGTCGTGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATCATAGTTAGCAGGAAATGGGGTTTCACCAAGTTTAACCGAACTGACTATCTGAAGTATAAGTCAGAGAACAGGATTCTGCCAGATGGTGTAAATGCAAAGCTTCTTGGATGCCATGGACCGCTGGCTAACCGTCAACCAGGAAGAGCTTTCCTGCCCTCTGCAACTGCTTAG 546 0.456 MLGIAKRSTIFPYFCQVLPYPAVQIILTFKLEFGFPNFDCWFFNWMVLSWVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYLKYKSENRILPDGVNAKLLGCHGPLANRQPGRAFLPSATA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g1900 181 Gene3D - 139 174 - -
Enph1g1900 181 Pfam Ribosomal protein L16p/L10e 50 126 IPR016180 GO:0003735|GO:0005840|GO:0006412
Enph1g1900 181 PANTHER 60S RIBOSOMAL PROTEIN L10 50 173 IPR001197 GO:0003735|GO:0005840|GO:0006412
Enph1g1900 181 SUPERFAMILY Ribosomal protein L16p/L10e 45 136 IPR036920 GO:0003735|GO:0005840|GO:0006412
Enph1g1900 181 ProSitePatterns Ribosomal protein L10e signature. 68 89 IPR018255 GO:0003735|GO:0005840|GO:0006412
Enph1g1900 181 Gene3D Ribosomal protein L10e/L16 42 138 IPR036920 GO:0003735|GO:0005840|GO:0006412
Enph1g1900 181 CDD Ribosomal_L16_L10e 51 126 IPR016180 GO:0003735|GO:0005840|GO:0006412
Enph1g1900 181 FunFam 60S ribosomal protein L10, putative 135 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g1900 Enph-Chr1 43770663 43773746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph1g1900 51 180 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 85.385 2.69e-80 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g1900 K02866 - pvy:116105818 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph7g0569 7 11751371 11753825 Enph1g1900 1 43770663 43773746 CCT