Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g1872 ATGAAAGCCCAAATCCAAACTGGCCCAGTTACCCTAATAGCCAGCGATAGGGTTTTATTCAATCTCAGATACAGGAAAGGAGCAGTAGAGAGGGAGAAGCACAGAGCGCCGAAGATGAAAACTATTCTCTCTTCCGAGACCATGGACATCCCCGAAGGAGTCACCGTCAAAGTGCACGCCAAGATCATCGAGGTAGAGGGGCCTCGTGGCAAGCTCATCCGTGATTTTAAGCACCTCAATCTTGATTTTCAGCTGATTACTGACGATAGTGGCAAGAAGAAGCTTAAGGTCGATGCGTGGTTTGGATCCCGTAAAACCTCTGCTGCCATACGAACTGCTCTCAGCCATGTGGAAAATCTTATTACTGGTGTCACCAAGGGGTACCGGTACAAGATGCGTTTTGTGTACGCCCATTTCCCCATTAACGCTAGTATCACCAACAGCAACAAGTCTATAGAAATCCGTAACTTCTTGGGTGAGAAGAAGGTGAGGAAGGTCGACATGTTGGACGGTGTTTCAATATTACGATCTGACAAGGTCAAGGATGAGCTGGTCTTGGATGGTAATGATATTGAGCTTGTTTCTCGGTCTGCAGCCCTCATCAACCAGAAATGCCATGTGAAAAATAAAGATATTCGGAAGTTTCTTGACGGGATCTATGTCAGTGAAAAGGGGACCATACTTGAAGAATAG 693 0.4618 MKAQIQTGPVTLIASDRVLFNLRYRKGAVEREKHRAPKMKTILSSETMDIPEGVTVKVHAKIIEVEGPRGKLIRDFKHLNLDFQLITDDSGKKKLKVDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNFLGEKKVRKVDMLDGVSILRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTILEE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g1872 230 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 39 228 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Enph1g1872 230 FunFam 60S ribosomal protein L9 39 127 - -
Enph1g1872 230 Gene3D - 128 230 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Enph1g1872 230 Gene3D - 39 127 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Enph1g1872 230 ProSitePatterns Ribosomal protein L6 signature 2. 203 224 IPR002359 GO:0003735|GO:0005840|GO:0006412
Enph1g1872 230 FunFam 60S ribosomal protein L9 128 230 - -
Enph1g1872 230 PIRSF RPL6p_RPL6a_RPL9e_RPL9o 39 227 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Enph1g1872 230 SUPERFAMILY Ribosomal protein L6 128 224 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Enph1g1872 230 SUPERFAMILY Ribosomal protein L6 39 127 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Enph1g1872 230 Pfam Ribosomal protein L6 139 218 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Enph1g1872 230 Pfam Ribosomal protein L6 50 127 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g1872 Enph-Chr1 43572024 43574390 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph1g1872 39 230 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 83.938 1.18e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g1872 K02940 - gmx:100306058 358.221