Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g1857 ATGGCCACGGGTGAGTTGGCCTGTACCTACGCCACTTTGATTCTCCAAGACGACGGAATCTCGATCACTGCAGAAAAGATTAGTGTGTTGGCGAAGGCGGCTAACGTGACTGTGGAATCTTACTGGCCTAGCCTATTTGCGAAGCTTGCCGGCAAGCGGAATATTGAGGATCTAATTTTGGATGCTGGTTCGGGCGGCGCTCCTGCTGTAGCGGTGGTTGCTCCTGTCGCAGGTGCTGGTGCCAGAGACGCTGCTGCCACAGCTGCTGCTGCTGAGGAAAAGAAGGAAGAACCAAAGGAAGAGAGTGACGATGACATGGGGTTCAGCTTGTTCGATTAG 339 0.5369 MATGELACTYATLILQDDGISITAEKISVLAKAANVTVESYWPSLFAKLAGKRNIEDLILDAGSGGAPAVAVVAPVAGAGARDAAATAAAAEEKKEEPKEESDDDMGFSLFD 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g1857 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 112 - -
Enph1g1857 112 CDD Ribosomal_P1 5 111 - -
Enph1g1857 112 MobiDBLite consensus disorder prediction 88 106 - -
Enph1g1857 112 Pfam 60s Acidic ribosomal protein 21 111 - -
Enph1g1857 112 MobiDBLite consensus disorder prediction 87 112 - -
Enph1g1857 112 Gene3D - 1 63 IPR038716 -
Enph1g1857 112 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Enph1g1857 112 FunFam 60S acidic ribosomal protein P1 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g1857 Enph-Chr1 43486854 43488431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph1g1857 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 60.000 4.06e-39 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g1857 K02942 - ncol:116261452 125.946