Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g1855 ATGGCGGTAGCTGAAAATGCCGGACCCATAATCGGCTCATCCAGTCAAAATTTAGACAGCAGTGTAGTTTCATCGGACACAACAGTGACAAATGAACTGGAGAAATCGAAACCCAGAACTGGTTCTATTGTAAATGGTTTAGAAACAGATGTTCAGCCTGTCAACGGCGATCAAAATCTAAATGATGTATTCAACCATCAGGATAGAGCTACTCCGGTCTCTAACGGTAATTACAAGTCTCAAATGGCTCAGATGCGAAATGGGTTCGAGGCTAATGGGGTTCAGAACCAGCAGATGGTGCTAAATAATAATAGCGGCTACGGAATTAAACAAATGTCTAACGGAGTACGAAATGGAGAAGATGGTGGTGAGAGTTTCAAGCGTGATATGAGGGATTTGGAAGAGTTGCTGTCAAAGTTGAATCCCATGGCGGAGGAATTTGTGCCACCATCACTTACAAATAATCTTGGATTCTTAGGTGGTGCTGGGTTCAGTTACCCTAACAACTTTCTACCCCACACTAATTTTGGCAATGTTAATGGACATACTAACAGAAGGAGGAAGAATGGATATAATCAAGGGAAGCGAAGAGCAAATAATAAAATGGATGCGGAGAAGAGAGAAGATATGATTAGGAAGACTGTTTATGTCTCTGACATTGATCAACAGGTCACTGAAGAGCAGCTGGCAGCTCTCTTTCTTAACTGTGGACAGGTAGAATCGGACTTGTTTTCTTTGGTATCTTTTTCCCAATTGATAATGGCAGACCATGTTATTGAATCAACTCCTTTTTCTGGGCCAAAGGTTGTTGACTGCCGAGTATGTGGGGATCCTAACTCTATTCTTCGTTTTGCCTTCATTGAGTTCACGGATGAAGGCAAGCCTGCAGACGGTGCGAGGGCTGCTTTGAACCTATCAGGCACTATGCTCGGATATTACCCAGTAAGAGTGCTGCCTTCAAAAACTGCTATTGCACCAGTCAATCCCTCATTTTTGCCCAGGTCTGAAGATGAAAGGGAGATGTGCTCAAGAACAATTTATTGCACAAATATTGATAAGAAGGTTACCCAGGCAGATGTTAAACTCTTCTTTGAATCTCTTTGTGGAGAGGTTCAACGCTTGAGGCTTCTTGGAGATTACCATCACTCAACTCGAATTGCATTTGTTGAATTTGCTTTGGCTGAAAGTGCAATTGCAGCTCTGAACTGTAGTGGTGTGATTTTGGGTTCGCTGCCTATCAGGGTCAGTCCATCAAAGACACCTGTCCGATCTCGTGCACCACGAGCTTCAATGCACTGA 1299 0.4326 MAVAENAGPIIGSSSQNLDSSVVSSDTTVTNELEKSKPRTGSIVNGLETDVQPVNGDQNLNDVFNHQDRATPVSNGNYKSQMAQMRNGFEANGVQNQQMVLNNNSGYGIKQMSNGVRNGEDGGESFKRDMRDLEELLSKLNPMAEEFVPPSLTNNLGFLGGAGFSYPNNFLPHTNFGNVNGHTNRRRKNGYNQGKRRANNKMDAEKREDMIRKTVYVSDIDQQVTEEQLAALFLNCGQVESDLFSLVSFSQLIMADHVIESTPFSGPKVVDCRVCGDPNSILRFAFIEFTDEGKPADGARAALNLSGTMLGYYPVRVLPSKTAIAPVNPSFLPRSEDEREMCSRTIYCTNIDKKVTQADVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFALAESAIAALNCSGVILGSLPIRVSPSKTPVRSRAPRASMH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g1855 432 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 346 413 IPR000504 GO:0003723
Enph1g1855 432 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 135 425 - -
Enph1g1855 432 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 213 322 IPR000504 GO:0003723
Enph1g1855 432 SUPERFAMILY RNA-binding domain, RBD 185 320 IPR035979 GO:0003676
Enph1g1855 432 SUPERFAMILY RNA-binding domain, RBD 333 425 IPR035979 GO:0003676
Enph1g1855 432 MobiDBLite consensus disorder prediction 1 44 - -
Enph1g1855 432 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 344 420 IPR000504 GO:0003723
Enph1g1855 432 SMART rrm1_1 214 318 IPR000504 GO:0003723
Enph1g1855 432 SMART rrm1_1 345 416 IPR000504 GO:0003723
Enph1g1855 432 Gene3D - 176 324 IPR012677 -
Enph1g1855 432 FunFam Polyadenylate-binding protein-interacting protein 10 338 416 - -
Enph1g1855 432 MobiDBLite consensus disorder prediction 177 204 - -
Enph1g1855 432 MobiDBLite consensus disorder prediction 9 44 - -
Enph1g1855 432 CDD RRM2_CID8_like 340 421 IPR034825 -
Enph1g1855 432 CDD RRM1_CID8_like 211 324 IPR034823 -
Enph1g1855 432 Gene3D - 330 427 IPR012677 -
Enph1g1855 432 Pfam Ataxin-2 C-terminal region 137 151 IPR009818 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g1855 Enph-Chr1 43459651 43465764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph1g1855 268 416 Eukaryotic Initiation Factors Gene Family AT2G36660 26.282 2.53e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g1855 - - qsa:O6P43_014935 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph1g1855 1 43459651 43465764 Enph1g1855 1 43459651 43465764 ECH