Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g1388 ATGGACTCTTTGAGGCCTTACCCTTACAACATAGCAACCACACTCTCCGAACCCTTAGCTAGTCTTCTCATCCAACTCTCTGCGCGGAATATGGGAGAAACAAAGGACGAAGGATACGAAGAAGAGCTCCTCGACTACGAAGAGGAAGAAGACAAAGCCACTGAATCCGTTGGAACCAAAGTCAATGGGGTTACGTTGGAATTCACAGTTCGGGATTCAGAGACTTTCTTTGAAGCCGGAGCTTCTTCGTGCCATCGTAATTCTTCTACCATAATCTTGTATTGGAGACTTAATATGGTTTTTTTGTTTGCAACTGGTTCCCTCGGCCCTGTTTTCTATGGTTTGTCATCAGTGCAACATGAATGTATTCCTCAAGCAATCCTTGGGATGGATGTGATTTGTCAAGCTAAATCTGGAATGGGAAAAACTGCTGTCTTTGTTCTCTCAATCTTGCAGCAGATTGATCCTGTTGCAGGCCAAGTTGCTGCACTTGTCCTGTGTCATACAAGGGAATTAGCATACCAGATATGCCATGAGTTTGAGAGGTTCAGTACCTACTTGCCTGATCTCAAGGTTGCTGTCTTCTATGGTGGTGTCAACATTAAAGTTCACAAGGATCTGTTGAAAAATGAGTGCCCCCATATTGTTGTTGGGACACCTGGAAGAATACTAGCATTGGGAAGGGATAAGGATCTTTCATTAAAGAATGTCAGGCATTTCATTTTGGATGAATGTGATAAGATGCTGGAATCACTGGACATGAGGAGAGATGTGCAAGAGATTTTCAAGATGACTCCACACGATAAGCAAGTTATGATGTTCTCTGCAACACTCAGCAAGGAAATTCGCCCAGTCTGCAAGAAGTTTATGCAAGATCCAATGGAAATTTATGTTGATGATGAGGCCAAGTTGACCCTTCATGGACTTGTGCAGCACTACATCAAATTGAAGGAGGAAGAAAAGAACCGGAAGTTGAATGATCTTCTTGATGCTCTAGACTTCAACCAAATTGTTATCTTTGTGAAGAGCGTCAGTAGAGCAGCTGAGCTGGACAAACTTCTTATGGAGTGCAACTTCCCATCTATATGCATCCACTCTGGCATGTCACAGGAGGAAAGGTTAAAGCGCTATAAAGGTTTTAAGGAGGGGCATACTAGGATTCTTGTTGCAACAGATTTGGTTGGCAGGGGAATTGACATTGAACGTGTTAACATTGTAATTAATTATGATATGCCTGATTCTGCAGATACCTACTTGCACAGGGTTGGCAGAGCTGGAAGGTTCGGCACCAAAGGTCTTGCAATTACATTTGTCTCATGTGCTGCTGATGTTGACGTTCTCAACAATGTTCAGTCAAGGTTTGAAGTTGATATCAAGCAGCTTCCTGAGCAGATTGACACATCTACCTACATGCCGTCATAG 1422 0.4304 MDSLRPYPYNIATTLSEPLASLLIQLSARNMGETKDEGYEEELLDYEEEEDKATESVGTKVNGVTLEFTVRDSETFFEAGASSCHRNSSTIILYWRLNMVFLFATGSLGPVFYGLSSVQHECIPQAILGMDVICQAKSGMGKTAVFVLSILQQIDPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALGRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQIVIFVKSVSRAAELDKLLMECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCAADVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g1388 473 Gene3D - 305 472 IPR027417 -
Enph1g1388 473 SMART helicmild6 348 429 IPR001650 -
Enph1g1388 473 FunFam DEAD-box ATP-dependent RNA helicase 56-like 102 298 - -
Enph1g1388 473 CDD SF2_C_DEAD 309 438 - -
Enph1g1388 473 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 308 469 IPR001650 -
Enph1g1388 473 FunFam DEAD-box ATP-dependent RNA helicase 305 473 - -
Enph1g1388 473 Gene3D - 110 304 IPR027417 -
Enph1g1388 473 Pfam Helicase conserved C-terminal domain 322 429 IPR001650 -
Enph1g1388 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 440 IPR027417 -
Enph1g1388 473 Pfam DEAD/DEAH box helicase 117 282 IPR011545 GO:0003676|GO:0005524
Enph1g1388 473 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 114 447 - -
Enph1g1388 473 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 123 296 IPR014001 -
Enph1g1388 473 CDD DEADc_DDX39 116 298 - -
Enph1g1388 473 SMART ultradead3 111 312 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g1388 Enph-Chr1 39414236 39419907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph1g1388 116 473 Eukaryotic Initiation Factors Gene Family AT5G11200 82.206 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g1388 K12812 - qsa:O6P43_015686 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph7g0965 7 15366898 15373533 Enph1g1388 1 39414236 39419907 CCT
Enph1g1388 1 39414236 39419907 Enph1g1388 1 39414236 39419907 ECH
Enph1g1388 1 39414236 39419907 Enph7g0965 7 15366898 15373533 ECH