Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g0175 ATGGGCTCCAGGAAGGGAGACAATCCTCACGCCGGCGATGGTGCCAGTCCTGGAAAAATATTCATCGGAGGATTAGCTAGGGATACAACATTAGAGCAATTCGTCAAGTATTTTGAGAAGTATGGAGAGATAATTGATTCGGTGATAATGAAAGATCGGCACACGGGTCGACCCAGGGGTTTCGGATTCATTACGTATGCAGATCCTTCTGTTGTGGACCGTGTTATTCAGGAGAACCATGTGATCAATGGCAAGCAGGTTGAGATCAAAAGGACTATTCCAAAGGGCTCATCACAGGCTAATGATTTTAAAACTAAGAAAATCTTTGTTGGCGGTATTCCAACCTCAGTAAGTGAAGATGAATTGAAGAACTTCTTTGCAAAGTTTGGAAAAGTTGCAGAACATGAGATCATTCGTGATCATACTACTAAACGCTCTCGGGGATTTGGATTTATTGTGTTTGACAGTGAAAAAGTTGTTGATAATTTACTGGCAAATGGAAACATGATTGATATGGCGGGCACTCAGGTTGAGATCAAGAAGGCTGAACCCAAGAAAGCCTCAAACCCAGCATCTTTTCCTGCATTTGGTAGTGATAGGGCACGCTCATACAGTGATGGTTATGGTGGATTTGGCGAATCATATAGCAGTTTTGGCAGTGGTGGTTTTGGTCCCGCTTCTTATAGGTCTCTTGGAGGTTTTGGCAGCAGGCTTGGTGATTACAGTGGGTATGGTGGTGATGAGTATGGTGATAGTTTTGGAGGCTATGGTGGTGGTGGTGGTTTTGCTGGTTATCGTGGTGATTCATCATTTGGCTATTCTAGTCGCTATGGTTCCTATATGGGGGGCCTTGGTGGTGGATATGGTGGAAGTGGGCTAGGTGCATATGGGCGAGGCGCAGGGGGCTTTGCAAGCTATGGTGGACCTGGTTCTGGTGGGGGTTATGACTCTGGCCCAGGTGCTGGCTATGGTGGGCCAGGTGCACTATATGGTAGTAGGGGAAGTTATGGTGGCAGTAGTCGTTACCACCCTTATGCAAGATAG 1044 0.4626 MGSRKGDNPHAGDGASPGKIFIGGLARDTTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYADPSVVDRVIQENHVINGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTSVSEDELKNFFAKFGKVAEHEIIRDHTTKRSRGFGFIVFDSEKVVDNLLANGNMIDMAGTQVEIKKAEPKKASNPASFPAFGSDRARSYSDGYGGFGESYSSFGSGGFGPASYRSLGGFGSRLGDYSGYGGDEYGDSFGGYGGGGGFAGYRGDSSFGYSSRYGSYMGGLGGGYGGSGLGAYGRGAGGFASYGGPGSGGGYDSGPGAGYGGPGALYGSRGSYGGSSRYHPYAR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g0175 347 Gene3D - 18 96 IPR012677 -
Enph1g0175 347 FunFam Heterogeneous nuclear ribonucleoprotein 1 17 98 - -
Enph1g0175 347 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 108 168 IPR000504 GO:0003723
Enph1g0175 347 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 86 IPR000504 GO:0003723
Enph1g0175 347 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 94 IPR000504 GO:0003723
Enph1g0175 347 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 4 347 - -
Enph1g0175 347 SUPERFAMILY RNA-binding domain, RBD 12 98 IPR035979 GO:0003676
Enph1g0175 347 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 106 184 IPR000504 GO:0003723
Enph1g0175 347 SMART rrm1_1 19 90 IPR000504 GO:0003723
Enph1g0175 347 SMART rrm1_1 107 180 IPR000504 GO:0003723
Enph1g0175 347 FunFam Heterogeneous nuclear ribonucleoprotein 1 99 223 - -
Enph1g0175 347 Gene3D - 97 217 IPR012677 -
Enph1g0175 347 SUPERFAMILY RNA-binding domain, RBD 99 213 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g0175 Enph-Chr1 17647078 17651557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph1g0175 4 196 Eukaryotic Initiation Factors Gene Family AT2G23350 25.792 4.74e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g0175 K12741 - gmx:100801373 402.905