LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph14g1122	ATGTCGCGGGTCTATGTTGGGAACTTAGACCCTCGGGTCACTGAGAGGGACCTCGAGGATGAATTTCGTATCTACGGTGTTCTCCTGAGTGTCTGGGTTGCTCGAAGGCCACCAGGATATGCATTTCTCGAATTTGATGATAGGAGGGATGCACTTGATGCTATTCATGCTCTGGATGGAAAAAATGGCTGGCGTGTAGAGCTTTCTCATAACTCCAAGGGTGGTGGAGGACGTGGTGGACGCGGGCGAGGAGGTGAGGACTTGAAATGTTACGAGTGTGGTGAGCCTGGTCATTTTGCAAGGGAGTGCCGATTGCGCATTGGTTCACGAGGCCTGGGAAGTGGGAGACGACAAAGCCCCAGTCCTTATCGGCGCCATAGAAGTCCAAGTTATGGTCGTAGGAGCTATAGCCCTTATGGGAGAAGATCTCCTGGAAGACGTAGCATAACACCTCCTCGATGTGGACACAGTTACAGCAGGTCTCCTCCGTACCGTCGCTCTCACCGTGACTCTCTTTATGCCAATGGGTAG	531	0.5254	MSRVYVGNLDPRVTERDLEDEFRIYGVLLSVWVARRPPGYAFLEFDDRRDALDAIHALDGKNGWRVELSHNSKGGGGRGGRGRGGEDLKCYECGEPGHFARECRLRIGSRGLGSGRRQSPSPYRRHRSPSYGRRSYSPYGRRSPGRRSITPPRCGHSYSRSPPYRRSHRDSLYANG	176

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph14g1122	176	CDD	RRM_SRSF3_like	3	71	-	-
	Enph14g1122	176	MobiDBLite	consensus disorder prediction	110	176	-	-
	Enph14g1122	176	SMART	rrm1_1	3	69	IPR000504	GO:0003723
	Enph14g1122	176	PANTHER	SERINE/ARGININE RICH SPLICING FACTOR	2	166	-	-
	Enph14g1122	176	ProSiteProfiles	Zinc finger CCHC-type profile.	89	104	IPR001878	GO:0003676\|GO:0008270
	Enph14g1122	176	Pfam	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	4	61	IPR000504	GO:0003723
	Enph14g1122	176	SMART	c2hcfinal6	89	105	IPR001878	GO:0003676\|GO:0008270
	Enph14g1122	176	FunFam	Serine/arginine-rich splicing factor RSZ21A isoform C	77	148	-	-
	Enph14g1122	176	Gene3D	-	77	131	-	-
	Enph14g1122	176	Pfam	Zinc knuckle	89	104	IPR001878	GO:0003676\|GO:0008270
	Enph14g1122	176	FunFam	Serine/arginine-rich splicing factor 7	2	69	-	-
	Enph14g1122	176	SUPERFAMILY	Retrovirus zinc finger-like domains	79	106	IPR036875	GO:0003676\|GO:0008270
	Enph14g1122	176	SUPERFAMILY	RNA-binding domain, RBD	3	84	IPR035979	GO:0003676
	Enph14g1122	176	Gene3D	-	2	69	IPR012677	-
	Enph14g1122	176	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	2	73	IPR000504	GO:0003723

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph14g1122	Enph-Chr14	12819660	12822013	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph14g1122	2	59	Eukaryotic Initiation Factors Gene Family	AT1G22760	41.935	7.35e-06	43.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph14g1122	K12896		-	jre:109019839	233.417