Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph14g0344 ATGCCAGTTCCACTTGCCCCTTACCCTGCACCCCCATCTCCACATACCCCGCCAGCTAATGGAGGTACACAACAGAGTCAGCTTGTATGTTGCGGGTGTAGAAACCTTCTGCTTTATCCAGTTGGAGCAACATCTGTGTGCTGTGCTGTTTGCAATGCAGTCACTGCAGTACCACCTCCTGGCACAGAAATGGCCCAGTTGGTTTGTGGAGCCTGCCACACCTTGCTCATGTACATCCGTGGGGCGACAAGCGTGCAATGCTCTTGCTGTCACACCGTCAATCTAGCTCTCGAAGCAAATCAGGTGGCACATGTAAATTGTGGCAATTGTAGAATGCTACTGATGTACCAATATGGAGCAAGATCGGTTAAATGTGCAGTCTGCAATTTTGTAACATCAATTGGGTTTAACAAGGGGGTCAAATTCAAGGAAAAAGTAATATTAGAAGATTGGATTGAAAAGCTTACATTCTTCTATTGGTCTTTGAATGGTTTCAGCGTGTCAACAAATAAATGGAAATGGCCCTGCATGTTGAACAAGTGGTGCCTAACGTGCCTTGCTCCGAAGTCTTTGGTGCCTCAAAGCACTGATCTGCAATTTCCCTATTACCTGCATACAAATAGAGAAATAGTGCTCTTCATAACAAACGCTTTCACCGCTGTTAAATTGATTCATTGTTTGAGAGAAGGAAGAACAAGCTCAGAGATGCAATCTACAAAAGAGAAGCTAGGCAACATGGCCAGTGCTGCCAAGGAGCACATTGACATCTACAAAGCCAAAATAGACAAAAAGGCAGAGAAGGCAACGGCAAGAACAGAGGAAGAGAAGGTAATGGCACATGAGCGTGGCAAGGCTAAGGAAGCTAAGGCAAAGATGGAGCTTCATGAAGCGAAAGCCAGGCATGCAGCAGAGAAGCTAAGCTCCAAGCAACCACATCAGTTTAGCCATCAAGATCCATCCCTAGCCGGAGCTCACCAACATGGGCTGAACCAACCAGCCACTAGGGCTGCTCCAATACCTGAAAACTCTTATCCACTTGCAGGAAACTATCCAGTGAACAAGCATATTTAG 1071 0.4613 MPVPLAPYPAPPSPHTPPANGGTQQSQLVCCGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGACHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSIGFNKGVKFKEKVILEDWIEKLTFFYWSLNGFSVSTNKWKWPCMLNKWCLTCLAPKSLVPQSTDLQFPYYLHTNREIVLFITNAFTAVKLIHCLREGRTSSEMQSTKEKLGNMASAAKEHIDIYKAKIDKKAEKATARTEEEKVMAHERGKAKEAKAKMELHEAKARHAAEKLSSKQPHQFSHQDPSLAGAHQHGLNQPATRAAPIPENSYPLAGNYPVNKHI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph14g0344 356 PANTHER PROTEIN LSD1 14 57 IPR040319 -
Enph14g0344 356 MobiDBLite consensus disorder prediction 1 20 - -
Enph14g0344 356 Pfam Late embryogenesis abundant (LEA) group 1 236 305 IPR005513 GO:0009793
Enph14g0344 356 NCBIfam zinc finger domain, LSD1 subclass 27 57 IPR005735 -
Enph14g0344 356 NCBIfam zinc finger domain, LSD1 subclass 66 95 IPR005735 -
Enph14g0344 356 NCBIfam zinc finger domain, LSD1 subclass 104 133 IPR005735 -
Enph14g0344 356 MobiDBLite consensus disorder prediction 1 18 - -
Enph14g0344 356 Coils Coil 278 305 - -
Enph14g0344 356 MobiDBLite consensus disorder prediction 301 356 - -
Enph14g0344 356 Pfam LSD1 zinc finger 107 131 IPR005735 -
Enph14g0344 356 Pfam LSD1 zinc finger 30 54 IPR005735 -
Enph14g0344 356 Pfam LSD1 zinc finger 69 93 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph14g0344 Enph-Chr14 5515916 5522060 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Enph14g0344 LEA_1 9.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph14g0344 - - tcc:18606063 240.736