Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enph14g0155 | ATGTCGTTCAGCGGAACCCAACAGAAATGCAAGGTTTGCGATAAAACTGCTCACTTCGTGGATTCAGTTTCAGCAGATGGTATCATTTATCACAAGACTTGCTTCAGATGCAGTCAATGCAACGGCAAACTTGCGATAAGCAACTACTCATCGTTGGATGGCGTGTTGTATTGCAAGCCTCACTTCGAACAGAATTTCAAAAGCACTGGTGGTGTCACAAGGAGATCCCTATCAAGAGACCTATTACTTTATTCCCATCTCTCTCTCTCTCACTTGATTTTGAAATGTTTGTATGTACAGACAAGGACACCAAGTAAGCTATCAGCTATGTTCTCTGGAACTCAAGACAAATGCTCGTCTTGCAAGAAAACTGTTTACCCACTGGAGAAGGTGACAGTGGAAGGAGAGTTTTATCACAAATCATGCTTTAGGTGTGCACAGGGAGGTTGCTTTATAAGCCCATCAAACTATGCAGCACTTGATGGGTTTCTATACTGCAAGCATCATTTTTCTCAGTTGTTCAAGGAGAAAGGCTGCTACAACCATGTCTCCAAATCTTCTTCCATGAAGAAAACTGAAGTCCAACTACCACCTGAAGCTGCTGCAGCAGCATCTGATTCAGAGGTTCCTGAATCTGATCCTCCTAAGCAAGATGAACCACACGAAGCTGAGTAG | 675 | 0.4326 | MSFSGTQQKCKVCDKTAHFVDSVSADGIIYHKTCFRCSQCNGKLAISNYSSLDGVLYCKPHFEQNFKSTGGVTRRSLSRDLLLYSHLSLSHLILKCLYVQTRTPSKLSAMFSGTQDKCSSCKKTVYPLEKVTVEGEFYHKSCFRCAQGGCFISPSNYAALDGFLYCKHHFSQLFKEKGCYNHVSKSSSMKKTEVQLPPEAAAAASDSEVPESDPPKQDEPHEAE | 224 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enph14g0155 | 224 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 3 | 35 | - | - | |
| Enph14g0155 | 224 | SMART | lim_4 | 117 | 169 | IPR001781 | - | |
| Enph14g0155 | 224 | SMART | lim_4 | 9 | 61 | IPR001781 | - | |
| Enph14g0155 | 224 | FunFam | LIM domain and actin-binding 1 | 4 | 74 | - | - | |
| Enph14g0155 | 224 | ProSiteProfiles | LIM domain profile. | 116 | 176 | IPR001781 | - | |
| Enph14g0155 | 224 | FunFam | LIM domain and actin-binding 1 | 112 | 182 | - | - | |
| Enph14g0155 | 224 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 144 | 183 | - | - | |
| Enph14g0155 | 224 | MobiDBLite | consensus disorder prediction | 190 | 224 | - | - | |
| Enph14g0155 | 224 | ProSiteProfiles | LIM domain profile. | 8 | 68 | IPR001781 | - | |
| Enph14g0155 | 224 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 36 | 72 | - | - | |
| Enph14g0155 | 224 | Gene3D | Cysteine Rich Protein | 112 | 182 | - | - | |
| Enph14g0155 | 224 | Gene3D | Cysteine Rich Protein | 4 | 73 | - | - | |
| Enph14g0155 | 224 | CDD | LIM2_SF3 | 118 | 178 | - | - | |
| Enph14g0155 | 224 | ProSitePatterns | LIM zinc-binding domain signature. | 10 | 44 | IPR001781 | - | |
| Enph14g0155 | 224 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 110 | 143 | - | - | |
| Enph14g0155 | 224 | PANTHER | OS06G0237300 PROTEIN | 106 | 206 | - | - | |
| Enph14g0155 | 224 | Pfam | LIM domain | 118 | 173 | IPR001781 | - | |
| Enph14g0155 | 224 | Pfam | LIM domain | 10 | 66 | IPR001781 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Enph14g0155 | Enph-Chr14 | 3549819 | 3551881 | Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | LIM | Enph14g0155 | LIM | 1.5e-09 | CL0167 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enph14g0155 | - | K24413 | vri:117906268 | 279.641 |