LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph13g1430	ATGGCAAGCGAACTTGAAAAGAAAGCTAAAGAAGCGTTCTTTGACGATGACTACCCTCTGGCTGTTCAATTATACTCTCAAGCAATCAATTCGGATCCCTCCAACGCCGATCTCTTTGTCGATAGAGCTCAGGCTCACATTAAACTCAACAACTTCACTGAAGCGGTTTCTGATGCAAACAAAGCGATCAATTTGAACCAATCGCTGGCAAAAGCTTATCTTCGTAAAGGGACGGCATGTCTTAAGCTTGAAGAATATCGTACTGCCAAGGTGGCGCTTGAGGTCGGTGCTTCTTTGGCTCCAGATGATTCACGATTTGCCAAGTTGATCGATGAATGTAATCGCCATGTTGCAAAGGAATCCGATGGTCTTACTAGCTCTTTATCATCAAATGGACCAGCATTGACTGTACCACCTAGTACAACTGAAGAAGAAGCTGGAAGATTTAGTTGTGTAAATCAGACAAACACAGATACCTCTGTGAAACCAAGATACAGACATGAATACTACCAAAAACCAGAGGAAGTGGTTTTAACGATTTTTGCAAAAGGAATACCAGCAAAAAATGTGGTTGTTGACTTCGGTGAACAGATTCTGAGTGTTACTATTGATGTTCCTGGCCAAGAAGCCTATCACTATCAATCTCGATTGTTTGGAAAGATAGTACCTGACAAGTGCAGATTTGAGGTGTTGTTAACCAAAGTTGAAATCCGTCTAGCAAAAGCTGAAGCTATAAATTGGACATCTTTTGAATACAGCAAGGAGGCATTTACTCAAACTAAAAACATCCCATCAACTGAATCCCACAGGCCTGCATACCCATCATCAAAGATAAATACAGATTGGGATAAGCTGGAAGCTCAAGTGAAGAAAGAGGAGAAGGAAGAAAAGCTAGATGGTGATGCTGGTTTGAACAAGCTGTTCCGAGACATATTCCAGAATGCTGATGAAGACATGAGGAGAGCGATGACCAAGTCTTTTGTGGAATCCAATGGAACAGTGCTGTCAACAGACTGGAAAGAAGTGGGATCAAAGAAGGTGGAAGGCAGTCCTCCTGAAGGTATGGAGCTGAGGAAATGGGAATACTAA	1089	0.4215	MASELEKKAKEAFFDDDYPLAVQLYSQAINSDPSNADLFVDRAQAHIKLNNFTEAVSDANKAINLNQSLAKAYLRKGTACLKLEEYRTAKVALEVGASLAPDDSRFAKLIDECNRHVAKESDGLTSSLSSNGPALTVPPSTTEEEAGRFSCVNQTNTDTSVKPRYRHEYYQKPEEVVLTIFAKGIPAKNVVVDFGEQILSVTIDVPGQEAYHYQSRLFGKIVPDKCRFEVLLTKVEIRLAKAEAINWTSFEYSKEAFTQTKNIPSTESHRPAYPSSKINTDWDKLEAQVKKEEKEEKLDGDAGLNKLFRDIFQNADEDMRRAMTKSFVESNGTVLSTDWKEVGSKKVEGSPPEGMELRKWEY	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph13g1430	362	Gene3D	-	163	254	IPR008978	-
	Enph13g1430	362	SUPERFAMILY	HSP20-like chaperones	154	258	IPR008978	-
	Enph13g1430	362	ProSiteProfiles	SGS domain profile.	272	362	IPR007699	-
	Enph13g1430	362	Pfam	SGS domain	281	360	IPR007699	-
	Enph13g1430	362	SUPERFAMILY	TPR-like	2	113	IPR011990	GO:0005515
	Enph13g1430	362	CDD	p23_CS_SGT1_like	168	251	-	-
	Enph13g1430	362	Gene3D	Tetratricopeptide repeat domain	1	126	IPR011990	GO:0005515
	Enph13g1430	362	Pfam	Tetratricopeptide repeat	37	67	IPR019734	GO:0005515
	Enph13g1430	362	FunFam	Protein SGT1 homolog A	160	264	-	-
	Enph13g1430	362	MobiDBLite	consensus disorder prediction	121	138	-	-
	Enph13g1430	362	ProSiteProfiles	TPR repeat profile.	36	69	IPR019734	GO:0005515
	Enph13g1430	362	ProSiteProfiles	CS domain profile.	162	251	IPR007052	-
	Enph13g1430	362	MobiDBLite	consensus disorder prediction	121	146	-	-
	Enph13g1430	362	Pfam	CS domain	166	241	IPR007052	-
	Enph13g1430	362	FunFam	Protein SGT1 homolog	1	127	-	-
	Enph13g1430	362	PANTHER	PROTEIN SGT1 HOMOLOG	1	360	IPR044563	GO:0051087
	Enph13g1430	362	SMART	tpr_5	36	69	IPR019734	GO:0005515
	Enph13g1430	362	SMART	tpr_5	70	103	IPR019734	GO:0005515
	Enph13g1430	362	SMART	tpr_5	2	35	IPR019734	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph13g1430	Enph-Chr13	19869568	19873618	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph13g1430	1	101	U-box Gene Family	AT3G07370	27.619	7.37e-06	45.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph13g1430	K12795		-	gmx:100784022	507.679