LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph13g1368	ATGAACTCGTCAATCGTAACAGAACGATCCAGGGCACTGTCGAAAATTCTCTGCAACTTAATCTTGGCTCGAAGCATGGGCGGGGGTCCTCGGACTTTCCCTGGCGGTGTCAACAAGTGGAAATGGAAGCGCATGCACGAAAAGCGAGCCAGAGATAAAGAGAGAAGGCTTCTCGAACAAGAAAAGCAGCTCTACCAGGCTCGTATTCGCTCTCATATCCGAGCCAAACTCGCCGGAAAACCTGACGCCTCAACCACTACTCACAGTCCTATGGCCCCGGAGGACCACATTAAGGCCTTAGCCAATCGATTTATGAAGGAAGGGGCTGAAGATCTTTGGAACAGAAATGATGGTCCCTTGAGGCCTCCGCCTCCGCGTCTCAGAGAATTTCCGGGATCAAGCAGACAGACAGGATCAATGGTGTCCCCGGTGGATCTGAGGAAACTCGTAATGGAAGGCCGTCACATGTTTTCGAATTGCTGCAACGACATTCAGACGACTACCAGTAGTAATTATACTCATACTAGGGGTTACTCAACGCACAGTCAAAGGAGGTTTCAGAGGAATGAGAGCTCTTCAGACGAGGGTGATCCCGACTGTGGTTTGGAGGGCAATCCTGCAAGGCCCATTTTCAGAAATTCACTCTTAAGTAATAAAAAAACCATGATTAAGGAAAATGCGGGCGATTATATTAACAAAAAGAAAAATATCCCGAAAAGGCAGCGAAAGCTATGGAGAGATGAGAGTTCTTCCAGTGAGAGCGAAGCGGATGTTGATTCAGACGGTTTAGGGATTGTCAGGAGCGTAAATAAGATTGGTAGCAGTTCTTCTCTGGGGAAGTACGACATAAAGACTAAGAGGAGGGTGCTACCGAATTCTTATGACGAGGAGACTGATCTTTCGGAGCAGGTTGAATTGATCAGATATGAACTAAAGAAGAGGAAGATGGCCAAGGACGAGCAGCAGAAAAGTGAAGAAGATACGTTGCTTGGTCAGAAAAGATTTGATGAATGTGGTATATCCCCATTGACAATCAAGGCACTTTCTTCTGCTGGTTATATTCACATGACCCGAGTTCAGGAGGCTACCCTTTCTGTTTGCCTTGAGGGAAAGGATGCTTTGGTCAAAGCTAAAACTGGCACAGGGAAAAGTGCAGCATTTTTGCTTCCTGCTATTGAAACAGTTCTTAAAGCAATGGGTGTGAAGTCCCCTCAACATGTGCCTCCAATACTTGTTCTTATCCTCTGCCCAACCAGAGAACTTGCTAGTCAAATTGCTGCTGAATTGAAAGTTCTACTGAAATACCATGATGGAATTGGAGTTCAGACACTAGTAGGAGGTATTCGATTTAAAGATGACCAAAAACGTCTTGAATCTGATCCATCCCAGATCATTGTTGCTACTCCAGGCAGGTTGCTGGATCATATTGAGTATAAGTCTGGAATATCTCTGCGGTTGATGGGTTTACAGATGCTTGTACTTGATGAAGCTGATCATTTATTAGACTTGGGTTTTCGAAAGAGTGTAGAAAAGCTTGTTGATTGTTTGCCTCGTCAAAGGCAATCCTTGCTATTTTCTGCAACCATTCCAAAGGAGGTCCGTCGTATATCTCAGCTTGTTCTGAAAAGGGATCACGTGTATATTGATACAGTGGGGATAAATTGTGTGGAAACCCCTGTTAAAGTAAAACAATCTTTTCTTGTTGCTTCTCATGAATCTCATTTTCAAATATTACACCATATTTTGAAGGAGCATATATTGCAAGCCCCTGATTATAAGGTTATTGTTTTCTGTGTAACTGGGATGGTGACTTCACTCTTGTATCAACTTTTCCGGGAGATGAAAATGAATGTTAGGGAGATACACTCCCGAAAACCTCAACTTTATCGAACTCGCATTTCAGATGAGTTCAGGGAATCCAAACAGCTGATTCTTATCTCATCTGATGTATCATCTCGTGGAATGAATTATCCTGATGTTACTTTAGTCATCCAGGTGGGCATTCCTATGGACCGAGAACAATATATTCATCGTGTTGGGAGGACTGGAAGAGAAGGCAAAGAAGGGGAAGGCATACTGTTGATTGCTCCATGGGAAGAGTACTTTTTAGATGAAATCAAGGATCTCCCTCTCACTAGATTCCCTTTACCAGATATAGATCCTGAGACAAATCTTAAGGTAGAAGATGCAATGGTAAAGATTGACAACGACGTTAAAGAATCAGCTTATCATAGTTGGCTCGGTTATTATAATTCAATAAGGGAGATTGGAAGAGATAAAACCACTCTATCTGAGTTAGCGAGCCAATTTTCTGAATCAATTGGTTTGCAGAGGCCTCCTGCTCTCTTCAGGAAGACTGCACTAAAAATGGGATTGAAAGATATTCCTGGCATTAGAATCCGGAGATAG	2409	0.433	MNSSIVTERSRALSKILCNLILARSMGGGPRTFPGGVNKWKWKRMHEKRARDKERRLLEQEKQLYQARIRSHIRAKLAGKPDASTTTHSPMAPEDHIKALANRFMKEGAEDLWNRNDGPLRPPPPRLREFPGSSRQTGSMVSPVDLRKLVMEGRHMFSNCCNDIQTTTSSNYTHTRGYSTHSQRRFQRNESSSDEGDPDCGLEGNPARPIFRNSLLSNKKTMIKENAGDYINKKKNIPKRQRKLWRDESSSSESEADVDSDGLGIVRSVNKIGSSSSLGKYDIKTKRRVLPNSYDEETDLSEQVELIRYELKKRKMAKDEQQKSEEDTLLGQKRFDECGISPLTIKALSSAGYIHMTRVQEATLSVCLEGKDALVKAKTGTGKSAAFLLPAIETVLKAMGVKSPQHVPPILVLILCPTRELASQIAAELKVLLKYHDGIGVQTLVGGIRFKDDQKRLESDPSQIIVATPGRLLDHIEYKSGISLRLMGLQMLVLDEADHLLDLGFRKSVEKLVDCLPRQRQSLLFSATIPKEVRRISQLVLKRDHVYIDTVGINCVETPVKVKQSFLVASHESHFQILHHILKEHILQAPDYKVIVFCVTGMVTSLLYQLFREMKMNVREIHSRKPQLYRTRISDEFRESKQLILISSDVSSRGMNYPDVTLVIQVGIPMDREQYIHRVGRTGREGKEGEGILLIAPWEEYFLDEIKDLPLTRFPLPDIDPETNLKVEDAMVKIDNDVKESAYHSWLGYYNSIREIGRDKTTLSELASQFSESIGLQRPPALFRKTALKMGLKDIPGIRIRR	802

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph13g1368	802	Gene3D	-	310	550	IPR027417	-
	Enph13g1368	802	CDD	SF2_C_DEAD	562	695	-	-
	Enph13g1368	802	ProSiteProfiles	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.	364	547	IPR014001	-
	Enph13g1368	802	Pfam	Helicase conserved C-terminal domain	580	685	IPR001650	-
	Enph13g1368	802	SMART	ultradead3	352	563	IPR014001	-
	Enph13g1368	802	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	410	703	IPR027417	-
	Enph13g1368	802	Pfam	DEAD/DEAH box helicase	357	535	IPR011545	GO:0003676\|GO:0005524
	Enph13g1368	802	MobiDBLite	consensus disorder prediction	232	260	-	-
	Enph13g1368	802	ProSiteProfiles	Superfamilies 1 and 2 helicase C-terminal domain profile.	581	731	IPR001650	-
	Enph13g1368	802	MobiDBLite	consensus disorder prediction	113	140	-	-
	Enph13g1368	802	PANTHER	RNA HELICASE	297	731	-	-
	Enph13g1368	802	MobiDBLite	consensus disorder prediction	232	253	-	-
	Enph13g1368	802	Gene3D	-	557	781	IPR027417	-
	Enph13g1368	802	Coils	Coil	43	63	-	-
	Enph13g1368	802	ProSiteProfiles	DEAD-box RNA helicase Q motif profile.	333	361	IPR014014	GO:0003724
	Enph13g1368	802	MobiDBLite	consensus disorder prediction	164	208	-	-
	Enph13g1368	802	MobiDBLite	consensus disorder prediction	164	186	-	-
	Enph13g1368	802	SMART	helicmild6	605	686	IPR001650	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph13g1368	Enph-Chr13	19340379	19345665	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph13g1368	335	711	Eukaryotic Initiation Factors Gene Family	AT3G19760	28.861	7.04e-44	162

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph13g1368	-		-	pcin:129284459	1358.2