Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g1337 ATGACTTTCATTCTTCCATTTTGTAGCTGCTTGTTGGTTACATGGATGTTCACAATCATCGGAAAAACAACACCAGCTTCAGGAATATTTCAACCCAGCCAATGGACTCCAACCAATGCCACATTTTACGGTGACGAGACTGCTTCCACCACCATGGGAGGAGCATGTGGATACGGAAATTTGGCTGCAAATGGTTACGGGACAGACACAGTGGCATTGAGCTCCACATTATTCAACAATGGGTATGCGTGCGGGGTTTGTTACCAAATAACATGCTATCAATCTATTGCGTGCTATCAGCACGTGCCTTATATCACTGTCACTGCCACCAACCTTTGCCCTCCCAACTGGGCCCAGCCCTCCGACAATGGTGGCTGGTGCAACCCACCTCGCTCTCATTTCGACATGTCCAAGCCGGCCTTCATGAAGATTGCCGACTGGCACTCCGGCATCATCCCCATCATGTACCGCCGAGTACCGTGTGTGAGGAGTGGAGGGATGAGGTTCTCTCTGGAGGGAAATGGGTACTGGTTATTGGTGTACGTGATGAATGTGGGAGGTGGAGGGGATATAGGAAGCATGTGGGTGAAGGGAAGCAACACAGGGTGGATAAGCATGAGCAGAAACTGGGGTGCTTCTTATCAGGCCTTTGCATCTCTGGCTGGTCAGACTCTTTCCTTCAAGCTTACTTCCTACACAACTCGCGACACCATTATTGCATGGAATGCTGTTCCTCCCAATTGGACCATCGGACTCACTTATTCTTCCAATCTCAACTTTTAA 783 0.493 MTFILPFCSCLLVTWMFTIIGKTTPASGIFQPSQWTPTNATFYGDETASTTMGGACGYGNLAANGYGTDTVALSSTLFNNGYACGVCYQITCYQSIACYQHVPYITVTATNLCPPNWAQPSDNGGWCNPPRSHFDMSKPAFMKIADWHSGIIPIMYRRVPCVRSGGMRFSLEGNGYWLLVYVMNVGGGGDIGSMWVKGSNTGWISMSRNWGASYQAFASLAGQTLSFKLTSYTTRDTIIAWNAVPPNWTIGLTYSSNLNF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g1337 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Enph13g1337 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Enph13g1337 260 PRINTS Expansin signature 65 79 IPR002963 GO:0009664
Enph13g1337 260 PRINTS Expansin signature 242 258 IPR002963 GO:0009664
Enph13g1337 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Enph13g1337 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Enph13g1337 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Enph13g1337 260 SMART dpbb_1 70 156 IPR007112 -
Enph13g1337 260 PANTHER EXPANSIN-A15 21 256 IPR002963 GO:0009664
Enph13g1337 260 SUPERFAMILY Barwin-like endoglucanases 34 184 IPR036908 -
Enph13g1337 260 Gene3D - 22 161 IPR036908 -
Enph13g1337 260 Pfam Expansin C-terminal domain 167 245 IPR007117 -
Enph13g1337 260 Gene3D - 167 260 IPR036749 -
Enph13g1337 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 256 IPR007117 -
Enph13g1337 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 53 166 IPR007112 -
Enph13g1337 260 SUPERFAMILY PHL pollen allergen 163 256 IPR036749 -
Enph13g1337 260 Pfam Lytic transglycolase 70 156 IPR009009 -
Enph13g1337 260 CDD DPBB_EXPA_N 34 161 - -
Enph13g1337 260 PRINTS Expansin/Lol pI family signature 34 49 IPR007118 GO:0005576
Enph13g1337 260 PRINTS Expansin/Lol pI family signature 52 70 IPR007118 GO:0005576
Enph13g1337 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Enph13g1337 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Enph13g1337 260 PRINTS Expansin/Lol pI family signature 74 92 IPR007118 GO:0005576
Enph13g1337 260 PRINTS Expansin/Lol pI family signature 242 256 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g1337 Enph-Chr13 19062727 19063713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g1337 7 260 Expansin Gene Family AT1G62980 61.811 3.19e-115 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g1337 - - gmx:100781459 444.506