Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g1217 ATGGCGAACCCATCTTCCTCAGCTCGCTCATCTGATTCTGGGCAGTTTACATACTCCGACGGCTCCTACTTCCCCATGCCTTTCCATCTTCAGCAATCTGCTTTCACGACGTCGTCTCACTATGCAGCGCCATATGTGGCGGCGTCACCGGCAGTGCAAATTCCCCCTCAAGCGCCTCCCGCCGCCGTATCTGGCGTTTACTCTTACCCGCAGTATCAGCAGGCGCAGCAGTTATTTCAACGTGATGCACAGACAATCACACCTGAGGCCCTCGAGAACGTCAAAGCAGCTATTGCTAACAGCGAGATCGAGCACAAGGCAGAGACAAGAAAGAAAGCGATTCCTCGTAAAGCTGCGGGGCAATCATGGGAGGATCCTTCGCTGGCAGACTGGCCAGAGAATGATCACCGGCTGTTTTGTGGTGATCTTGGTAATGAGGTGAATGACGATGTCCTTTCGAAAGCTTTTTCGCGATTTCCTTCTTTTAACATGGCCAGAGTTGTGAGGGATAAGCGGAGTGGGAAAACAAAAGGCTATGGATTTGTTAGCTTTGCGGATACTTCTGATCTTGCTGTTGCTCTGAAAGAGATGAATGGTAAATATGTTGGAAATAGGCCAATCAAATTGTGCAGGAGTAAGTGGAAGGAGAGAACAGATTATAATGCTCTTGATAAACATAAGAAACAACCTCGGAAGAAACCTAAACCTACAAAAGTGGGTGTATTACATTACTGA 735 0.4803 MANPSSSARSSDSGQFTYSDGSYFPMPFHLQQSAFTTSSHYAAPYVAASPAVQIPPQAPPAAVSGVYSYPQYQQAQQLFQRDAQTITPEALENVKAAIANSEIEHKAETRKKAIPRKAAGQSWEDPSLADWPENDHRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRSGKTKGYGFVSFADTSDLAVALKEMNGKYVGNRPIKLCRSKWKERTDYNALDKHKKQPRKKPKPTKVGVLHY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g1217 244 Coils Coil 91 111 - -
Enph13g1217 244 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 54 221 - -
Enph13g1217 244 Gene3D - 71 210 IPR012677 -
Enph13g1217 244 SUPERFAMILY RNA-binding domain, RBD 120 218 IPR035979 GO:0003676
Enph13g1217 244 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 136 214 IPR000504 GO:0003723
Enph13g1217 244 MobiDBLite consensus disorder prediction 227 244 - -
Enph13g1217 244 CDD RRM_RBM42 130 212 IPR034215 -
Enph13g1217 244 MobiDBLite consensus disorder prediction 108 129 - -
Enph13g1217 244 SMART rrm1_1 137 210 IPR000504 GO:0003723
Enph13g1217 244 MobiDBLite consensus disorder prediction 220 244 - -
Enph13g1217 244 FunFam RNA-binding protein 42 71 221 - -
Enph13g1217 244 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 138 208 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g1217 Enph-Chr13 18009971 18010705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g1217 138 216 Eukaryotic Initiation Factors Gene Family AT2G23350 37.975 6.17e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g1217 K25079 - qsa:O6P43_011258 329.717