Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g1187 ATGCTGATTCTATCTCCCTTCACGTCTCTCATTTTGGCTGATTCTGTTCCTATTGTATGTCTGGGGGCTGAGAACGATGCCAAACCAGCTATGGTTTGTACTGCCAATGATTTACAAGGATGGAAAGATTTTCCCAAGGGACTTAGGGTTCTTCTCCTTGATGGGGACACCAATTCTGCTGCCGATATAAGAGCAAAGCTGGAGGCCATGGACTATATTGTTTCTATATTCTGCAATGAGAACGAAGCCTTGTCAGCAATCTCAAGCAAACCTGAAGGCTTTCATGTTGCCATAGTGGAGGTTAGCTCAAGTGATAGCCAGGGATGTTTCAAATTTCTTGAGAATGCCAAGGACTTGCCAACCATTATGACTTCAAGTGATCATTGCCTCAGCACCATGATGAAGTGCATAGCACTTGGTGCAGTTGAGTTCCTAAGCAAACCACTCTCTGAGGACAAGCTCAGGAATATCTGGCAGCACGTGGTTCACAAGGCATTTAATGCCAGGGCAAGTGTCCTGTCTGAATCACTAAAACCTGTTAAAGAATCTGTAGTATCAATGTTGCAACTCCAAACAGACAGTAAGGAACATGGAAGTAAAATTTCAATAGATTTAGAGAAGGTATCAAGGTTCAGTGAAAATGACCATGAGCTGTCATCTGGGAGTGATAATAAATACCCAGCTCCGTCAACTCCACAATTAAAACAGGGGGCTAGATTACTGGATGACGGTGATTGTCATGAACAGACTCACTGCATGAGCATGACTGAAAAAGAAAGTGGAGATCTGGATGGGGAATCTAAATCTGTCGAAACTACATGTGGGACTTCAAATTCTGAAGGTACTACACCTCAAGAGAGGAAGGCTGAAATGACTCTAATCAAGAAGGAAGAGAACTTTGCCAATGGTTCCAAGAATGAGGGAGTTATGTCTCCACATATTCATGATGGAAATATTGTCAATGATGATAGTAATGCATCTCCAAACAAAGTAGGTGTTCTTAGTGATCCATGTGAGGTCACAGCTGATAGGAAGAAATCAAAGAAGATGAAGGTAGACTGGTCGCCTGAGTTGCACAACAAATTTGTTCAGGCAGTGGAACAATTAGGTATCGATCAAGCCATACCTTCTCGAATTCTGGAGCTAATGAAAGTAGAGGGCTTGACAAGGCATAATGTAGCTAGCCATCTTCAGAAATATAGAATGCACAAGAGACATATCTTACCGAAGGAAGAAGATCGAAGATGGCCACATCAAAGAGATATAATGCAAAGGAGCTATTATATGCCGAGACCAATTATGGCTTTTCCTCCATATCATTCCAATCACACCTTATCTCCAGCTCCTATGTATCCTATGTGGGGACAACCTGGCAGTCAACCGGCTGGTGCACAGATGTGGGGCCCTCCTAACTATCACCTGTGGCAGCCTTTTCCAGGGATGCATGCAGAAGCATGGGGTTGCCCAGTGTTGCCACCTTCCCGAAATCCTTGTTTTCCCCACACTCAACAGGTGCCTGGATTGCACAATGCTAATAATGTTGAGTATAACTCCAGCATGCCACCAAGTTCATTTGAGCATCATCCGGCAGATGATGTTGTTGACAAGGTTGTAAAGGAGGCAATAAGCAAGCCATGGCTCCCCTTGCCCTTAGGCCTCAAAGCACCTTCCACAGATAGTGTATTGGCTGAACTCTCTAGGCAAGGTATATCCACCATCCCGCATGGAACCAAGGGTTCCAAATCTGAATAG 1752 0.4412 MLILSPFTSLILADSVPIVCLGAENDAKPAMVCTANDLQGWKDFPKGLRVLLLDGDTNSAADIRAKLEAMDYIVSIFCNENEALSAISSKPEGFHVAIVEVSSSDSQGCFKFLENAKDLPTIMTSSDHCLSTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNARASVLSESLKPVKESVVSMLQLQTDSKEHGSKISIDLEKVSRFSENDHELSSGSDNKYPAPSTPQLKQGARLLDDGDCHEQTHCMSMTEKESGDLDGESKSVETTCGTSNSEGTTPQERKAEMTLIKKEENFANGSKNEGVMSPHIHDGNIVNDDSNASPNKVGVLSDPCEVTADRKKSKKMKVDWSPELHNKFVQAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRHILPKEEDRRWPHQRDIMQRSYYMPRPIMAFPPYHSNHTLSPAPMYPMWGQPGSQPAGAQMWGPPNYHLWQPFPGMHAEAWGCPVLPPSRNPCFPHTQQVPGLHNANNVEYNSSMPPSSFEHHPADDVVDKVVKEAISKPWLPLPLGLKAPSTDSVLAELSRQGISTIPHGTKGSKSE 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g1187 583 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 346 405 IPR017930 -
Enph13g1187 583 NCBIfam myb-like DNA-binding domain, SHAQKYF class 349 404 IPR006447 GO:0003677
Enph13g1187 583 MobiDBLite consensus disorder prediction 256 286 - -
Enph13g1187 583 FunFam Two-component response regulator-like APRR2 47 173 - -
Enph13g1187 583 Gene3D - 48 175 - -
Enph13g1187 583 Pfam Myb-like DNA-binding domain 352 401 IPR001005 -
Enph13g1187 583 SUPERFAMILY CheY-like 46 167 IPR011006 -
Enph13g1187 583 FunFam Two-component response regulator 345 408 - -
Enph13g1187 583 SMART REC_2 48 158 IPR001789 GO:0000160
Enph13g1187 583 ProSiteProfiles Response regulatory domain profile. 49 162 IPR001789 GO:0000160
Enph13g1187 583 PANTHER TRANSCRIPTION ACTIVATOR GLK1 31 575 IPR044825 GO:0003700|GO:0045893
Enph13g1187 583 MobiDBLite consensus disorder prediction 212 236 - -
Enph13g1187 583 Gene3D - 345 407 - -
Enph13g1187 583 SUPERFAMILY Homeodomain-like 348 406 IPR009057 -
Enph13g1187 583 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g1187 Enph-Chr13 17615225 17622049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g1187 31 574 Response Regulator Gene Family AT4G18020 48.705 1.88e-143 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Enph13g1187 Myb_DNA-binding 6.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g1187 - - gmx:100784905 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g1187 13 17615225 17622049 Enph14g0325 14 5368099 5375000 CCT