Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g1168 ATGCCTGTTCCACTTGCCCCCTGCCCGACGCCTCCAGCTCCATATACTCCTCCAGCAAATGGTGCACAGAGTCAGCTTGTGTGTTCAGGGTGTAGAAATCTTCTACTGTATCCTGTTGGAGCCACCTCTGTTTGTTGTGCGGTTTGCAATGCAGTCACAGCTGTGCCTCCTCCTGGCACAGAAATGGCCCAGTTGGTTTGTGGAGGTTGCCACACTTTACTTATGTACATCCGTGGAGCCACAAGTGTTCAATGCTCTTGCTGTCACACTGTCAATCTAGCTTTAGAAGCAAATCAGGTGGCTCATGTCAGTTGCGGGAACTGCAGGATGCTACTGATGTACCAATATGGAGTAAGATCGGTGAAATGTGCTGTTTGCAATTTTATGACATCAGTTGGGGTCTCAGCAAGTACGACTGAGCAGAAGTTTAGTACTTAA 438 0.484 MPVPLAPCPTPPAPYTPPANGAQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVSCGNCRMLLMYQYGVRSVKCAVCNFMTSVGVSASTTEQKFST 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g1168 145 NCBIfam zinc finger domain, LSD1 subclass 64 93 IPR005735 -
Enph13g1168 145 NCBIfam zinc finger domain, LSD1 subclass 102 130 IPR005735 -
Enph13g1168 145 NCBIfam zinc finger domain, LSD1 subclass 25 55 IPR005735 -
Enph13g1168 145 PANTHER PROTEIN LSD1 11 55 IPR040319 -
Enph13g1168 145 Pfam LSD1 zinc finger 67 91 IPR005735 -
Enph13g1168 145 Pfam LSD1 zinc finger 28 52 IPR005735 -
Enph13g1168 145 Pfam LSD1 zinc finger 105 128 IPR005735 -
Enph13g1168 145 SUPERFAMILY Multiheme cytochromes 28 126 IPR036280 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g1168 Enph-Chr13 17442265 17445687 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Enph13g1168 zf-LSD1 8.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g1168 - - qsu:112000975 267.7