LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph13g1112	ATGGCCATAAGGCCATTACAATTCACCTTCTCGCGCGACAGATTGGTCTGTTTTTTTCGTACTAATCCTTCGTTCTCCTGCTTTCTCTGGAATTCTAATATAGCCCCATCCTCCCATTCACCTCATCACATTATTGCCTCCCGTCACTTCGTTGCAATTGCATCAACTCCGCTTTCACGCCCTCACGAGTACCATCCGCCACCGCAGCCACACGGGAGCCGCCTCCGACTGCCGTCACAACCTGACACCCTGGCGCAGAAGTTTGGAAAATCAACTCGCCGCCCAGGCGCCTCCTCTAAGGCGAGGGTTTATGTTGACGTCAACGTTGCCCGCCCCAAGGAGTACTGGGACTACGAGTCCCTCGCCGTCCAGTGGGGGGAGCAAGATGATTATGAGGTAGTCAAGAAGGTGGGAAGGGGGAAATACAGCGAGGTGTTCGAGGGTGTCCATTGCACGAACAATGAAAAATGTGTCATCAAGATTCTCAAACCAGTGAAGAAAAAGAAGATCAAGAGGGAGATCAAAATATTGCAGAATCTTTGTGGAGGACCTAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAGCAGTCAAAGACTCCAAGCCTAATTTTTGAATATGTGAATAACACTGATTTTAAAGTTCTCTATCCTACACTTTCAGACTTGGATATACGATTCTACATCTATGAACTTTTAAAGGCCTTGGATTATTGCCATTCTCAAGGGATCATGCATCGGGATGTGAAGCCACATAATGTTATGATTGATCATGAACAACATAAGCTTCGTTTGATAGATTGGGGGCTGGCCGAGTTCTATCATCCTGGCAAAGAATATAATGTCCGTGTTGCATCAAGATATTTTAAAGGCCCTGAGCTCCTTGTTGATCTTCAAGATTATGATTATTCTTTAGATTTGTGGAGCCTTGGTAGTATGCTAGCTGGAATGATATTCCGTAAGGAGCCATTCTTCTATGGCCATGATAATTATGATCAGCTAGTCAAAATAGCAAAGGTACTTGGGACAGATGAGTTGAATGCATATCTGAGCAAGTACCGCATAGAGTTGGACCCACATCTTGCTGCACTTGTTGGGAGGCATAGCCGGAAACCTTGGGCAAAGTTCATTAATGTAGACAATCAACACCTGGCTGTTCCTGAGGCTATTGACTTTGTTGACAAGTTACTGCAGTATGATCACCAAGAACGTCCTACTGCAAAAGAAGCCATGGCGCATCCTTACTTCAATCCAATCAGAAACGCAGAAAGTAGCCAAACTCGTACGCACTAA	1293	0.4509	MAIRPLQFTFSRDRLVCFFRTNPSFSCFLWNSNIAPSSHSPHHIIASRHFVAIASTPLSRPHEYHPPPQPHGSRLRLPSQPDTLAQKFGKSTRRPGASSKARVYVDVNVARPKEYWDYESLAVQWGEQDDYEVVKKVGRGKYSEVFEGVHCTNNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDLDIRFYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQHKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGSMLAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLSKYRIELDPHLAALVGRHSRKPWAKFINVDNQHLAVPEAIDFVDKLLQYDHQERPTAKEAMAHPYFNPIRNAESSQTRTH	430

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Enph13g1112	430	FunFam	Casein kinase II subunit alpha	208	419	-	-
Enph13g1112	430	Pfam	Protein kinase domain	131	416	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Enph13g1112	430	CDD	STKc_CK2_alpha	112	416	IPR045216	GO:0004674\|GO:0006468
Enph13g1112	430	MobiDBLite	consensus disorder prediction	410	430	-	-
Enph13g1112	430	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	244	256	IPR008271	GO:0004672\|GO:0006468
Enph13g1112	430	Gene3D	Transferase(Phosphotransferase) domain 1	208	416	-	-
Enph13g1112	430	Gene3D	Phosphorylase Kinase; domain 1	131	207	-	-
Enph13g1112	430	SMART	serkin_6	131	416	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Enph13g1112	430	PANTHER	CASEIN KINASE II SUBUNIT ALPHA	92	426	IPR045216	GO:0004674\|GO:0006468
Enph13g1112	430	ProSiteProfiles	Protein kinase domain profile.	131	416	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph13g1112	Enph-Chr13	16940710	16947118	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph13g1112	129	419	Core Cell Cycle Gene Families	AT1G76540	30.063	3.36e-39	141

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CK2	Enph13g1112		Pkinase	2.6e-65	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph13g1112	K03097		-	qsa:O6P43_024562	707.597

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