Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g1057 ATGGACGACATGGCTGCCTACTACACACAATCCCAGCCTTCGACTCATACTTTTCCATATTATCAACATCCTCATCCATCGTCGCTTGCGGTGGTACCGCCGCCTCCTGGCGCGGCTCCTCCCGCCCCCCCACCATCTCCCTTCGCACAACCCATGTTTGCTTCTTACGGCCCTCCTATTCCACTTCAGTATTCCGCCGATGAGGTCCGGACACTATTCATCGCCGGCCTTCCCGAAGATGTGAAGCCTCGCGAAATCTACAATCTGTTTCGAGAGTTTCCCGGTTATGAGTCATCACATCTCCGGAGCCCGACTGATTCGTCGCAGGCTTTTGCTTTTGCTGTATTCACTAATCAGCAATCTGCACTCATGGCAATGCATGCATTAAACGGGATGGTCTTTGACCTTGAAGAGGGGTCAACTCTATATATAGATTTAGCAAAATCCAACTCTAGGTCTAAGCGCACAAGAATAGATGATGAAATAGTTGGCTCAGATAAGAAAGCTAGAGGATCTTCACTTTCAAGGGCAAATCATGATTCTGGTGTTGGCAGCATACACATGCCTGGAATGAGTAATTCTGCTTACAACACGAACACGTATGGTTATCCATCTGCACAAAGTCAATGGTATGTTGATGGTAAAGCTGTTAATGACAGTGCAGCTGCAAAGTCGAGTAATTCCTCTCGCATTCCACAAAATGTGACCCCATGTCCAACTTTATTTGTGGCTAACCTGGGGCCATCTTGTACGGAACAAGAGCTTATGCAAGTATTTTCCAGATGTCCGGGATTTTTGAAACTGAAGATGCAGAGCACATACGGAGCTCCAGTTGCATTTGTTGATTTTCAGGATGTTGCCAGTTCTACTGGAGCTCTTAACAGTCTGCAAGGCACGATTCTTTACTCCTCAACAGCTAGCGAGGGAATGCGGTTAGCATTTGCGAAATCACGGATGGGCATGCGGAAGAAGCCGAAGTAA 981 0.474 MDDMAAYYTQSQPSTHTFPYYQHPHPSSLAVVPPPPGAAPPAPPPSPFAQPMFASYGPPIPLQYSADEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPTDSSQAFAFAVFTNQQSALMAMHALNGMVFDLEEGSTLYIDLAKSNSRSKRTRIDDEIVGSDKKARGSSLSRANHDSGVGSIHMPGMSNSAYNTNTYGYPSAQSQWYVDGKAVNDSAAAKSSNSSRIPQNVTPCPTLFVANLGPSCTEQELMQVFSRCPGFLKLKMQSTYGAPVAFVDFQDVASSTGALNSLQGTILYSSTASEGMRLAFAKSRMGMRKKPK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g1057 326 SUPERFAMILY RNA-binding domain, RBD 69 304 IPR035979 GO:0003676
Enph13g1057 326 Gene3D - 231 325 IPR012677 -
Enph13g1057 326 Gene3D - 66 159 IPR012677 -
Enph13g1057 326 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 209 317 - -
Enph13g1057 326 FunFam RNA-binding protein with multiple splicing 231 322 - -
Enph13g1057 326 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 239 317 IPR000504 GO:0003723
Enph13g1057 326 FunFam RNA-binding protein with multiple splicing 2 67 157 - -
Enph13g1057 326 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 70 149 IPR000504 GO:0003723
Enph13g1057 326 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 72 135 IPR000504 GO:0003723
Enph13g1057 326 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 241 305 IPR000504 GO:0003723
Enph13g1057 326 MobiDBLite consensus disorder prediction 162 186 - -
Enph13g1057 326 SMART rrm1_1 240 309 IPR000504 GO:0003723
Enph13g1057 326 SMART rrm1_1 71 145 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g1057 Enph-Chr13 16527841 16533526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g1057 56 260 Eukaryotic Initiation Factors Gene Family AT4G34110 23.387 3.06e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g1057 - - pcin:129284491 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g1057 13 16527841 16533526 Enph13g1057 13 16527841 16533526 ECH