LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph13g0978	ATGGACCTGGCGGAATTAAGTGCAGAACAAGTTCTGAGGAGGGATATCCCATGGGAGACGTATATGAGCACCAAGCTGATCTCAGGCACTAGCCTTCAGCTCTTAAGGCGTTATGACCATAAATCACAAAGTCAAAGAGCACAGTTGCTGGATGATGATGGTCCTGCTTATATACGAGTGTTTATTCATGTTTTGCGCGATGTACGTAAAGATGAGACCGTGGAATATGTTCTGGCTTTGATTGATGAAATGCTTACAGCAAATCCAAAACGAGCAAGACTGTTTCATGATAAATCCCTTGATGATGCCTATGAACCTTTCTTAATAATTTCAATTCCCCCAATTTGTCAATATAGTGCCAGGCCAAAAAATCAGCACAGCAGTGTCTCAAATGGTGAAGCGTCAAATTCAAAGAAACCATTTACTACTATTGATGATGTTTTAAAAGAATTGGTAAAATGGCTTTGCGAACAGCTGAGGAACCCTAATCATCCTAGTCGCAGTGTGCCAACTGCTATCAGTTGTCTATCAGCTCTTCTTAAGGAACCTGTGGTAAGATCTTCATTTGTTCAGGCAGGTGGCGTCAAGTTGCTTGTACCTTTGATTTCTCCGGCATCCACTCAACAGTCTATTCAGCTCCTATATGAAACATGTCTGTGCATATGGCTCCTATCCTATTATGAGCCAGCAATTGAATATCTGGCTACTTCAAGAACCCTTCCCCGACTTATTGATGTCGTTAAGAGTTCTACTAAAGAGAAGGTTGTTAGAGTAGTCATCTTAACCCTTAAGAACTTGCTGTCAAAAGGGACATTGGGTGCTCAAATGGTTGACCTTCAGCTGCCACAAGTTGTTCAGAATTTGAAATCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCGCTGAATTTCATGGAAGACGGGCTCAAGGATAAGATCAAGAAACTAAGTTCTTTTGATAAATATAAACAAGAAGTTCTCCTGGGCAATCTGGATTGGTCTCCCATGCACAAAGATCCCATATTCTGGCGAGAAAACATTACCAACTTTGAGGAAAATAACTTTCAGATTTTAAGGGTTTTGATAACAATTTTGGACACGTCAGGTGATCCAAGGACTCTGGCTGTTGCTTGCTTTGACCTTTCACAATTTGTCCAGCGTCATGCAGCTGGGAGGATCATAGTGACAGACCTTAAAGCAAAGGAACGAGTGATGAAACTAATGAATCATGAGAACGCTGAGGTCACCAAAAATGCACTGCTATGTATCCAACGGCTCTTCTTGGGTGCAAAGTATGCAAGCTTTTTGCAGTCTTAG	1317	0.4176	MDLAELSAEQVLRRDIPWETYMSTKLISGTSLQLLRRYDHKSQSQRAQLLDDDGPAYIRVFIHVLRDVRKDETVEYVLALIDEMLTANPKRARLFHDKSLDDAYEPFLIISIPPICQYSARPKNQHSSVSNGEASNSKKPFTTIDDVLKELVKWLCEQLRNPNHPSRSVPTAISCLSALLKEPVVRSSFVQAGGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRTLPRLIDVVKSSTKEKVVRVVILTLKNLLSKGTLGAQMVDLQLPQVVQNLKSQAWSDEDLLEALNFMEDGLKDKIKKLSSFDKYKQEVLLGNLDWSPMHKDPIFWRENITNFEENNFQILRVLITILDTSGDPRTLAVACFDLSQFVQRHAAGRIIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQS	438

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Enph13g0978	438	PIRSF	V-ATP_synth_H	1	437	IPR004908	GO:0000221\|GO:0046961\|GO:1902600
Enph13g0978	438	SUPERFAMILY	ARM repeat	8	428	IPR016024	-
Enph13g0978	438	Gene3D	-	330	430	IPR038497	-
Enph13g0978	438	PANTHER	V-TYPE PROTON ATPASE SUBUNIT H	3	437	IPR004908	GO:0000221\|GO:0046961\|GO:1902600
Enph13g0978	438	SMART	arm_5	227	268	IPR000225	GO:0005515
Enph13g0978	438	SMART	arm_5	181	226	IPR000225	GO:0005515
Enph13g0978	438	SMART	arm_5	388	428	IPR000225	GO:0005515
Enph13g0978	438	Pfam	V-ATPase subunit H	315	427	IPR011987	GO:0000221\|GO:1902600
Enph13g0978	438	Pfam	V-ATPase subunit H	7	309	IPR004908	GO:0000221\|GO:0046961\|GO:1902600
Enph13g0978	438	FunFam	V-type proton ATPase subunit H	329	430	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph13g0978	Enph-Chr13	15765081	15772027	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph13g0978	1	438	Primary Pumps ATPases(2)	AT3G42050	73.451	0.0	670

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph13g0978	K02144		-	gmx:100788723	723.776

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Enph13g0978	13	15765081	15772027	Enph13g0978	13	15765081	15772027	ECH

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