Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0946 TTCGGTCGTCCAACTCCATCTTCTCTGGCTTCTCCGATAGGGCTTCCATTTCTCTGCGATTCAAGAAAGAAATACTCGTTCTCTTTGAAGTGCATATTTTCCTTCCTTTCCCCCCCTCTTCTGCTCCACCATTTCTCTGTCAGTTTTGTGTTTGATTTAGGGCTCAGGATGGAGGAGAATAACGGATTGAAGAGCAATGGAGATGTAAAGTCACCTGCTTTGGTTGTAAAGAGTGAGATGGAGACAGAGGAAGTAGATGTTAAGAATGAAGAGTCTTCATTTATATCAAAATCAATGGCAGAAGAGGAAAAACAGCTTTTGGAAACTCGAATCAAGGAGGAGGAGGAGGAATCCAAACATGTGCCAGAGGAGGCACCCGACCTTAATGAAACTCAGTTTAGCAAGTTGGATGAGCTTTTAACACAAACGCAACTGTACTCGGAATTTCTATTGGAGAAAATGGATGACATCACACTTAACGGCGGTGAAGAAGAGGATGAGCCGGCTCAGAAAAAGAGGGGCCGTGGCTCAAAAAGAAAAGATAAGTCAGATTACAATAATAAGAAAGCCAAAAGGGCAGTTGCTGCCATGCTTACAAGATCTAAAGAAAGTGAAAGCGCTGAGGATATGAACCTGACAGAAGAGGAAAGAACTGATAAGGAGCAGAAAGAGCTTATACCTCTGTTGACAGGTGGGAAGTTGAAGCAATATCAAATGAAGGGTGTCAAATGGTTGATCTCCTTGTGGCAAAATGGATTAAATGGGATTTTGGCTGATCAAATGGGTCTTGGGAAGACGATTCAAACTATTGGTTTCCTTGCACATCTAAAAGGGAAAGGTTTGGATGGCCCATACTTGATAATTGCTCCTCTATCAACCCTTTCTAATTGGATGAATGAAATTTCTCGGTTTGCTCCAACCCTCACTGCTATTATTTACCATGGTGACAAGAAGGAAAGGGATGAGATCCGAAGGAACCATATGCCCAGAACAATTGGTCCAAAATTTCCCATAGTCATCACTTCCTATGAAGTTGCATTAAATGACGCAAAGAGATATCTCAGGTTTTACCATTGGAAATATGTTGTAATTGACGAGGGACATAGACTCAAAAACTCAAAATGCAAATTAGTCCAGATGTTGAAATTCTTACCTGTTGAAAATAAGCTTCTTTTAACTGGGACACCTCTTCAGAATAACTTGGCTGAGCTATGGTCATTGTTGAACTTCATTTTACCTGACATTTTCTCATCCCTTGAAGAATTTGAGTCATGGTTTAATCTGTCAGGAAAATGCAGTAATGGAGCAACTAAGGAAGAATTAGAAGAGCGAAGAAGAGCCCAGGCATGCATTAATATGACAGCTTTTGTGGTAGCTAAGCTCCATGCCATTCTACGCCCCTTTCTTCTTCGAAGGATGAAGAGTGATGTTGAGCACATGTTACCACGAAAGAAAGAGATCATTTTATATGCCAGTATGACTGACCATCAGAAGAATTTTCAGGAACATTTAATTAACAAGACATTGGAGGAATTTTTACGTGAAAAATCTGCAGTTGGACGTGCTTCTAAAAATCTTCGTAATGTGGTCATTCAACTTAGGAAGAACTGTAATCATCCTGACCTCTTAGAGTCAGCCTTTGATGATTCATTTCTCTATCCACCTATCAATGAGATTATTGAACAGTGTGGAAAATTCTGTTTGCTAGACCGTCTCTTGGCTCGATTGTTTGCACGGAAGCACAAAGTTCTGATCTTCAGCCAGTGGACTAAAATTTTAGATATAATGGATTACTATTTTAGTGAAAAGGGCCTTGAAGTTTGCAGAATTGATGGTAGTGTGAAACTAGATGAAAGGAAAAGACAGATTCAGGAGTTTAATGATGTAAACAGCAATTACAGGATCTTTCTTCTCAGTACTAGGGCTGGTGGATTGGGAATTAACCTTACTGCAGCTGACACTTGCATTATTTATGACAGTGATTGGAATCCTCAGATTGATTTACAGGCCATGGATAGATGTCACAGAATAGGTCAAACTAAGCCTGTTCATGTTTACAGGCTTGCAACAGCTCACTCTGTAGAGGGTCGCATGTTGAAAAGAGCTTTCAGCAAGTTGAAGCTTGAGCATGTGGTGATTGGAAAAGGACAATTTCATCAAGAACGGATGAAGCCCAACTGTATGGACATCAAAGAGGATGAGGAATTGTTGGAATTGCTTCAAGAGGAGGAATCTGCTGAAGACAAAGCGATCCAAACAGATATTAGTGATGAAGACTTAGAGAAGCTTTTGGATCGCAGTGACCTTATATCAGGTAACTTTAACTGTCCAATCAAAACTATTCCTCTTAAAGGGCCTGGATGGGAGGTGGTGATTCCAACAGCAGCTGGGAGCATGCTTTCTACTCTTAATAGCTAA 2418 0.4053 FGRPTPSSLASPIGLPFLCDSRKKYSFSLKCIFSFLSPPLLLHHFSVSFVFDLGLRMEENNGLKSNGDVKSPALVVKSEMETEEVDVKNEESSFISKSMAEEEKQLLETRIKEEEEESKHVPEEAPDLNETQFSKLDELLTQTQLYSEFLLEKMDDITLNGGEEEDEPAQKKRGRGSKRKDKSDYNNKKAKRAVAAMLTRSKESESAEDMNLTEEERTDKEQKELIPLLTGGKLKQYQMKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPLSTLSNWMNEISRFAPTLTAIIYHGDKKERDEIRRNHMPRTIGPKFPIVITSYEVALNDAKRYLRFYHWKYVVIDEGHRLKNSKCKLVQMLKFLPVENKLLLTGTPLQNNLAELWSLLNFILPDIFSSLEEFESWFNLSGKCSNGATKEELEERRRAQACINMTAFVVAKLHAILRPFLLRRMKSDVEHMLPRKKEIILYASMTDHQKNFQEHLINKTLEEFLREKSAVGRASKNLRNVVIQLRKNCNHPDLLESAFDDSFLYPPINEIIEQCGKFCLLDRLLARLFARKHKVLIFSQWTKILDIMDYYFSEKGLEVCRIDGSVKLDERKRQIQEFNDVNSNYRIFLLSTRAGGLGINLTAADTCIIYDSDWNPQIDLQAMDRCHRIGQTKPVHVYRLATAHSVEGRMLKRAFSKLKLEHVVIGKGQFHQERMKPNCMDIKEDEELLELLQEEESAEDKAIQTDISDEDLEKLLDRSDLISGNFNCPIKTIPLKGPGWEVVIPTAAGSMLSTLNS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0946 805 MobiDBLite consensus disorder prediction 164 189 - -
Enph13g0946 805 SMART helicmild6 594 678 IPR001650 -
Enph13g0946 805 PANTHER SNF2/RAD54 HELICASE FAMILY 78 748 - -
Enph13g0946 805 Gene3D - 478 779 IPR027417 -
Enph13g0946 805 SMART ultradead3 230 425 IPR014001 -
Enph13g0946 805 MobiDBLite consensus disorder prediction 196 219 - -
Enph13g0946 805 Pfam Helicase conserved C-terminal domain 572 678 IPR001650 -
Enph13g0946 805 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 246 414 IPR014001 -
Enph13g0946 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 771 IPR027417 -
Enph13g0946 805 FunFam ATP-dependent DNA helicase DDM1 228 481 - -
Enph13g0946 805 Pfam SNF2-related domain 237 542 IPR000330 GO:0005524|GO:0140658
Enph13g0946 805 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 568 761 IPR001650 -
Enph13g0946 805 FunFam Chromatin complex subunit A 106 482 709 - -
Enph13g0946 805 MobiDBLite consensus disorder prediction 160 219 - -
Enph13g0946 805 CDD SF2_C_SNF 554 688 - -
Enph13g0946 805 Gene3D - 199 460 IPR038718 -
Enph13g0946 805 Coils Coil 97 119 - -
Enph13g0946 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 472 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0946 Enph-Chr13 15495051 15501028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0946 220 699 RAD5 or RAD16-like Gene Family AT3G16600 25.043 2.72e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Enph13g0946 SNF2_N 6.5e-65 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0946 K19001 - cave:132188478 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g0946 13 15495051 15501028 Enph13g0946 13 15495051 15501028 ECH