Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0918 ATGTCCCTAAGAAGCATAATTTGTGAACTCAAGGAGATGAAAGATGGAATGGCCTGCATATCAAGGGGATGTTCTGATGCCAAACAATGGCGTCATCAAACAAACTCACATATTGTTCTTGATGTTCAGCAGGGACAATGGGCAAATCTACCACCTGAATTGCTTTCGGATATAATCAGGAGGGTTGAAGAGAGTGAGACATCTTGGCCTGCACGTGCTGTCGTTCTATCTTGTGCTTCAGTTTGTAAATCATGGAGAGCAATCACAAAGGAGATTGTTCAGACTCCAGAGCAATGTGGACGCCTCACATTTCCTATCTCATTGAAGCAACCAGGGCCTAGGGATTCTCTAATTCATTGCTTTATCGAGAGGATTAAAGAAAATGGTACTTATCTGCTTTACTCAGGTCCGGAGCCATCGGAGAATAACAAAGATAAGTTGTTATTGGCTGCCAAAAAGATTGGAAGAATGACATACGCAGACTTCGTCGTATCTTTGGTTGCTAATGAATTCTGTCGGGTCAGCAAAACATATGTTGGCAAACTGAGGCAAGTTTCTGCTTTTTCAAAGAAACTTCTCACACATTTTCAAAATTTTCATCTTGCTCCAGGAGAAGCTGGAGTTGAACCCAACAGTCGATCTAAGCATAGATTTCATTCAAACAAAGCGTCCCTCAGAGTTCCATGCAACTACAATGTTGGTACCGTTACATATAACCACAGCTTTGTTCACAGATATAGGCTGCGGCAAATCCGAAAGCCGAGAAAAATGAACTGCATCATGAACAGTATTCCTTTGTCAGCTATTCAGGAAGGGGGCACAGCTCCAACTCCTACATCATTTCCTGATAGCTTTGAAGAGCCATTTTCTATATCATCAGTTCTGAAATGGAAAAACCCCATTAGATTTTCAAGCTTCTCAGAGACAGCAGTATTGAGGAAGGGCTCAATGGAGCCTCTAACACTTAAGAACAAACCTCCTAGATGGCATCAACAACAGCAGTGCTGGTGCCTGACCAGCGTCAAGTCTCGTAATGATAGAATACCATCTTCTAAGAATTTCCAGCTTGTGGTTGATGTCGATCAGTCTCATAACGTTTCTGCTGAACAACAAAAGAAGGTAATCTTGGAATGCGGTAAGATAGGAAAAGACATATTTACTATGGATTACTGTTATCCACTCTCAGCATTTCAAGCCTTCGCCATCTGCTTGAGCAGCTTGAATGCTAAATCATCAACCTGA 1242 0.4195 MSLRSIICELKEMKDGMACISRGCSDAKQWRHQTNSHIVLDVQQGQWANLPPELLSDIIRRVEESETSWPARAVVLSCASVCKSWRAITKEIVQTPEQCGRLTFPISLKQPGPRDSLIHCFIERIKENGTYLLYSGPEPSENNKDKLLLAAKKIGRMTYADFVVSLVANEFCRVSKTYVGKLRQVSAFSKKLLTHFQNFHLAPGEAGVEPNSRSKHRFHSNKASLRVPCNYNVGTVTYNHSFVHRYRLRQIRKPRKMNCIMNSIPLSAIQEGGTAPTPTSFPDSFEEPFSISSVLKWKNPIRFSSFSETAVLRKGSMEPLTLKNKPPRWHQQQQCWCLTSVKSRNDRIPSSKNFQLVVDVDQSHNVSAEQQKKVILECGKIGKDIFTMDYCYPLSAFQAFAICLSSLNAKSST 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0918 413 Gene3D Tubby Protein; Chain A 107 408 IPR025659 -
Enph13g0918 413 PANTHER TUBBY-RELATED 28 410 - -
Enph13g0918 413 PRINTS Tubby superfamily signature 236 263 IPR000007 -
Enph13g0918 413 PRINTS Tubby superfamily signature 162 178 IPR000007 -
Enph13g0918 413 PRINTS Tubby superfamily signature 371 390 IPR000007 -
Enph13g0918 413 PRINTS Tubby superfamily signature 392 413 IPR000007 -
Enph13g0918 413 PRINTS Tubby superfamily signature 322 339 IPR000007 -
Enph13g0918 413 CDD F-box_AtTLP-like 47 91 - -
Enph13g0918 413 Gene3D - 41 95 - -
Enph13g0918 413 SUPERFAMILY Tubby C-terminal domain-like 96 411 IPR025659 -
Enph13g0918 413 Pfam Tub family 108 408 IPR000007 -
Enph13g0918 413 Pfam F-box domain 47 94 IPR001810 GO:0005515
Enph13g0918 413 SUPERFAMILY F-box domain 44 91 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0918 Enph-Chr13 15272778 15274497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0918 1 410 TUB Transcription Factor Family AT2G18280 49.762 1.11e-122 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Enph13g0918 Tub 1.7e-67 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0918 K19600 - gmx:100798958 466.463