Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0882 ATGGGAAGAGGAAAGATTGAGATCAAGCTGATCGAGAACCCCACCAACAGGCAGGTCACATACTCCAAGCGACGCAATGGCATCTTCAAGAAAGCTCATGAGCTCAGTGTTCTCTGTGATGCTAAGGTCTCCCTCATCATGTTCTCCAAAAACAACAAGATGCACGAGTACATCTCTCCCGGTCTCACAACGAAGAAGATGATTGATCAGTATCAGAAAGCGTTGGGGAATGTTGATTTGTGGCGTGCCCACCATGAGAGAATGCTGGAAAACTTGAGAAAACTGACAGAGATAAACTATGAGCTCAAAGGACAGATCAGGAATAGGCTAGGAGCAGATTTGGACAATCTGAACTTCGAGCAACTGCACAGTCTTGAGGAGGACATAATTTCTTCCTCTGCGATCATACGTGAACGAAAGCTTCAAGTGATCAAGAGTCGGACCGAGACCTGCAAGAAAAAGGTTAAAAACTTGGAGCAGGTGAACGATACTCTTGTGCTTGGACTTAAGGAAAAGTGTATTATAGATGCACAGTATGGTATTGAGGAGGAAGGAGATGTGGAAACAGCAGCAGTTACAATAGGCATTGGTGACTCCAACCTCTATGGATTGTCTCAACACCACAACCACTTCAATTGTCAGCATCCCCACGATCCTCGACTCGCTTGA 669 0.4544 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYISPGLTTKKMIDQYQKALGNVDLWRAHHERMLENLRKLTEINYELKGQIRNRLGADLDNLNFEQLHSLEEDIISSSAIIRERKLQVIKSRTETCKKKVKNLEQVNDTLVLGLKEKCIIDAQYGIEEEGDVETAAVTIGIGDSNLYGLSQHHNHFNCQHPHDPRLA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0882 222 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Enph13g0882 222 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Enph13g0882 222 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Enph13g0882 222 Pfam K-box region 84 165 IPR002487 GO:0003700|GO:0005634|GO:0006355
Enph13g0882 222 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
Enph13g0882 222 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Enph13g0882 222 Gene3D - 14 97 IPR036879 GO:0003677|GO:0046983
Enph13g0882 222 ProSiteProfiles K-box domain profile. 85 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Enph13g0882 222 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Enph13g0882 222 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 57 IPR002100 GO:0003677|GO:0046983
Enph13g0882 222 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Enph13g0882 222 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Enph13g0882 222 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0882 Enph-Chr13 14987900 14989850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0882 1 210 MADS-box Gene Family AT3G54340 48.571 2.61e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Enph13g0882 K-box 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0882 K09264 - gmx:100784496 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g0882 13 14987900 14989850 Enph13g0882 13 14987900 14989850 ECH