Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0880 ATGCTTTACCAAACTCAACATCATCCTCTTCTCTTTCAATTTCATCCCTTCGCTCCTTCCATTTCTCCACTTCCACCCTCCTCACCCTTTTCTCATCTCCCTCTGCTTCAGGCTGAAACACAAATGGAGTGCGTCGAAGCAGCGTTGAAGACCAGTTTTAGGAAGGACACGACCATGAAATTTAACCCACAGCCTTTTGTAGATGACTGGTCCGCCTTCACTGTCCCAAATGCCGCCCCTTCCGACGACTTCTCAGTCGACGAACTCCTCGATTTTTCCCACTTGGAAGAGCCATCCGAAGAAGAACAGTTGCAACACAAGGCTGACTCTGCTTCTGTTTACCTTCCACCAGAGGAAGCAACTCCTCACTTTGCCCTCGCTTGCTCTGTCAAAGACGATGTTGACTCTTTGCCGTCCGGCGAACTTAGCGTTCCGGCTGATGATTTGGCAAACTTAGAGTGGTTGTCTCATTTTGTCGAAGATTCTTTCTCTGTATATTCCACTTCGTATCCCGCCGGAACTCTGACGGAAAAACCCAAGGGCCATGCGGAGCAAGGGCCCGAACCAGAGAGCCGTCTTTCGAGCCCCCCCTGTTTTAAGACTCCCGTTCCGGCCAAAGCCCGAAGCAAGAGAAGAAGGACGGGAGTTCGGGTTTGGCCATTCAGGTCTCCTTCCTTCAGCGAATCATCCTCAAGCTCTACCTCATCCTCCTCCTCCTCCTCGTCTCCCGCAAGCCCCTGTTTAATTTCCGCCAACGCAGCGATCGAGCATGTGTGCACTGAGGGCAAGCCACCAGTGAAAAGACCGAAGAAAAAGCCCGCGCCAGAGGGTGCTGTGGGGACGCCACGCCGTTGCACCCACTGCGGCGTGCACAAGACGCCGCAGTGGCGGACGGGTCCGCTCGGAGCGAAGACGTTGTGCAACGCTTGCGGTGTCCGATACAAGTCGGGTCGGCTCCTACCGGAATACAGGCCAGCCTGTAGCCCGACATTCTCGAGCGAATTGCACTCGAACCATCACCGGAAGGTGATGGAGATGCGGCGGAAGAAGGAGGGAGCGGAGGGAGGCGAGTCGAGTTTAGGTGGGGCCCCGAGTCCGATGGTTGCGAGTTTTTGA 1116 0.5493 MLYQTQHHPLLFQFHPFAPSISPLPPSSPFSHLPLLQAETQMECVEAALKTSFRKDTTMKFNPQPFVDDWSAFTVPNAAPSDDFSVDELLDFSHLEEPSEEEQLQHKADSASVYLPPEEATPHFALACSVKDDVDSLPSGELSVPADDLANLEWLSHFVEDSFSVYSTSYPAGTLTEKPKGHAEQGPEPESRLSSPPCFKTPVPAKARSKRRRTGVRVWPFRSPSFSESSSSSTSSSSSSSSPASPCLISANAAIEHVCTEGKPPVKRPKKKPAPEGAVGTPRRCTHCGVHKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGAEGGESSLGGAPSPMVASF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0880 371 Gene3D - 278 353 IPR013088 GO:0006355|GO:0008270
Enph13g0880 371 SMART GATA_3 279 333 IPR000679 GO:0006355|GO:0043565
Enph13g0880 371 MobiDBLite consensus disorder prediction 261 282 - -
Enph13g0880 371 Pfam GATA zinc finger 285 319 IPR000679 GO:0006355|GO:0043565
Enph13g0880 371 ProSiteProfiles GATA-type zinc finger domain profile. 279 315 IPR000679 GO:0006355|GO:0043565
Enph13g0880 371 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 279 341 - -
Enph13g0880 371 MobiDBLite consensus disorder prediction 176 244 - -
Enph13g0880 371 FunFam GATA transcription factor 276 359 - -
Enph13g0880 371 PANTHER GATA TRANSCRIPTION FACTOR 78 351 - -
Enph13g0880 371 ProSitePatterns GATA-type zinc finger domain. 285 310 IPR000679 GO:0006355|GO:0043565
Enph13g0880 371 MobiDBLite consensus disorder prediction 348 371 - -
Enph13g0880 371 MobiDBLite consensus disorder prediction 223 244 - -
Enph13g0880 371 CDD ZnF_GATA 284 332 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0880 Enph-Chr13 14971579 14973743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0880 46 361 C2C2-Gata Transcription Factor Family AT5G66320 50.606 2.13e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Enph13g0880 GATA 1.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0880 - - zju:107410110 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g0880 13 14971579 14973743 Enph14g0588 14 7739336 7741183 CCT
Enph14g0588 14 7739336 7741183 Enph13g0880 13 14971579 14973743 ECH
Enph13g0880 13 14971579 14973743 Enph13g0880 13 14971579 14973743 ECH