Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0788 ATGGGAGGTGATAGTGCCGTTGATGATGCCACCGCCACCCAGTCCAAGGGCAGCGATGCAGTGATAATCAACATTCGATGCTCCAATGGTTCGAAATTCTCGGTTCAGATTAGCCTCGAATCCACCGTCGGATTGTTCAAGGAGCTTGTCGCTCGGAATTGCGATATCCCCGCTGATCAACAGCGGCTGATCTATAAGGGTCGGATCTTAAAGGACGATCAAATCCTGCAAAGCTACGGTTTAGAGGCCGATCACACTGTCCATTTAGTTCGTGGTTTTGCCCCAGTTGGTGCAGCCAATGCAGCTGGTGGGACCAATACCAGTGGTACAAATACCACAACAAATAATGCGAGAAGTGCAACTAATGAAGGTGGGGGTATAGGAGGTGCTGGTTTTGGAGATTCACTGTTTCCTGGACTTGGCATCAATGGGCTTGGGGGAAGTGGCATCAATGGCTTGTTTGGAGCAGGCCTTCTGGATCCTGAACAAATGCAGCAACCATTTATTTCTAATCCCAATATGATGAGAGAAATGATGAACACACCTGCTATACAGAATCTACTTAATAACCCTGAGATAATGCGGAGTTTTATAATGAGCAATCCACAATTAAGAGAGCTCATGGATCGAAATCCTGAACTAGCACATATACTCAATGATCCGGCCACTCTCCGTCAAACGCTTGAAGCTACAAGAAACCCTGAGATCATGCGAGAAATGATGAGAAATACAGATAGAGCAATGAGCAACATTGAATCTTCTCCTGAGGGATTCAACATGCTTAGGCGCATGTACGAAAATGTTCAAGAACCATTCTTAGATGCCACAACAATGGCTGGTAATACAGGAAATGACAACTCTAACCCATTTGCTGCACTTTTGGGCACTCAAGGTGGACAGGCTAGGGATAGGTCTACTAATCCTTCAACTACTAGTGCTGAAGCAACTGCTGCTGGAGGTGCTCAAAATAACACTGCAAGGACAACTACTGGTGGGGACACTAGGCAGCAGGCTCCCACTGGCTTAGGAGGACTTGGTTTGCAGGATTATCAAGGTATGTTGGGTGCTATGCCTGATCCAGCATTATTGACCCAGTTAATGCAAAATCCAGCTATTTCACAAATGATGCAAAGTATGCTTTCCAACCCACAGGCTATGAATCAGATTCTTGGTGTCAATCCTGATCAGCGAGGCTTACCAGACCTAAATTCTCATCTTCGAGATGTAATGCAAAATCCTGAGTTCCTTCGCTTGTTGTCTTCACCTGAGACAATGCAGCAACTCTTGTCTTTTCAACAAGCTCTTCTTTCTCAGCTTGGTCGATCACCATCAACTCAGGAATCAGGTCAGACTGGTGGGGGAACTGGAGCGGCAAATAACTCAGGGTTGGAGATGTTGATGAACATGTTTGGTGGACTTGGGGCTGGTAGCCTTGCTGTTCCTAACAGATCGAATGAGCCACCGGAGCAATTGTATGCCACCCAGTTGTCACAGCTTCAAGAGATGGGCTTCTTTGATACGCAAGAGAACATTCGAGCTCTTATCGCCACTCAAGGGAATGTTCATGCTGCAGTTGAACGGCTTCTGGGGAACTCTGGCCAGTAG 1605 0.466 MGGDSAVDDATATQSKGSDAVIINIRCSNGSKFSVQISLESTVGLFKELVARNCDIPADQQRLIYKGRILKDDQILQSYGLEADHTVHLVRGFAPVGAANAAGGTNTSGTNTTTNNARSATNEGGGIGGAGFGDSLFPGLGINGLGGSGINGLFGAGLLDPEQMQQPFISNPNMMREMMNTPAIQNLLNNPEIMRSFIMSNPQLRELMDRNPELAHILNDPATLRQTLEATRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLDATTMAGNTGNDNSNPFAALLGTQGGQARDRSTNPSTTSAEATAAGGAQNNTARTTTGGDTRQQAPTGLGGLGLQDYQGMLGAMPDPALLTQLMQNPAISQMMQSMLSNPQAMNQILGVNPDQRGLPDLNSHLRDVMQNPEFLRLLSSPETMQQLLSFQQALLSQLGRSPSTQESGQTGGGTGAANNSGLEMLMNMFGGLGAGSLAVPNRSNEPPEQLYATQLSQLQEMGFFDTQENIRALIATQGNVHAAVERLLGNSGQ 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0788 534 CDD Ubl_Dsk2p_like 23 93 - -
Enph13g0788 534 MobiDBLite consensus disorder prediction 439 460 - -
Enph13g0788 534 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 486 531 IPR015940 -
Enph13g0788 534 SUPERFAMILY UBA-like 488 530 IPR009060 GO:0005515
Enph13g0788 534 SUPERFAMILY Ubiquitin-like 11 100 IPR029071 -
Enph13g0788 534 SMART uba_6 492 530 IPR015940 -
Enph13g0788 534 Gene3D - 8 102 - -
Enph13g0788 534 Gene3D - 196 254 - -
Enph13g0788 534 Pfam UBA/TS-N domain 492 528 IPR015940 -
Enph13g0788 534 Gene3D - 474 534 - -
Enph13g0788 534 CDD UBA_PLICs 492 530 - -
Enph13g0788 534 PANTHER UBIQUILIN 21 529 IPR015496 -
Enph13g0788 534 FunFam Ubiquitin domain-containing protein DSK2b 18 105 - -
Enph13g0788 534 ProSiteProfiles Ubiquitin domain profile. 21 90 IPR000626 GO:0005515
Enph13g0788 534 Pfam Ubiquitin family 23 90 IPR000626 GO:0005515
Enph13g0788 534 MobiDBLite consensus disorder prediction 279 344 - -
Enph13g0788 534 FunFam Ubiquitin domain-containing protein DSK2b 475 533 - -
Enph13g0788 534 SMART CBM 151 188 IPR006636 -
Enph13g0788 534 SMART CBM 359 400 IPR006636 -
Enph13g0788 534 SMART CBM 201 240 IPR006636 -
Enph13g0788 534 SMART CBM 402 428 IPR006636 -
Enph13g0788 534 MobiDBLite consensus disorder prediction 279 337 - -
Enph13g0788 534 SMART ubq_7 21 92 IPR000626 GO:0005515
Enph13g0788 534 FunFam Ubiquitin domain-containing protein DSK2b 198 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0788 Enph-Chr13 14249310 14256425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0788 23 90 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 30.882 2.54e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0788 K04523 - gmx:100776447 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g0788 13 14249310 14256425 Enph14g0815 14 10091284 10096756 CCT
Enph13g0788 13 14249310 14256425 Enph13g0788 13 14249310 14256425 ECH