Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0601 ATGGCGAACCTCTCAGAGACCTATGCTTGCGCGCCTTCCACCGAGCGTGGCCGGGGCATCCTCATTTCCGGCGACCCGAAATCCAACAACATTCTGTACTGCACCGGGCGATCCGTCATGATCCGCAACCTCGATAACCCGCTTCAGGTTTCCGTCTATGGCGAGCATGGCTACCCGGTCACTGTGGCACGGTACTCTCCCAACGGAGAATGGATTGCTTCAGCCGATATTTCCGGCACTTGGTCCGTCGACGGGTTGAGGATCGTTGCTTGCGGGGATGGCAAGGGGAAGTCCTTTGTTCGTGCTTTTATGTGGGATTCAGGCAGCACCGTTGGGGATTTTGATGGTCATTCACGGCGAGTTTTAAGCTGTGCGTTCAAACCAACTAGGCCTTTTCGTATTGTCACATGTGGGGAAGACTTTTTGGTAAATTTTTATGATGGTCCACCATTCAAGTTCAACATGTCCATCAGGGATCATTCAAATTTTGTGAATTGTGTTAGATTTTCCCCTGATGGGACCAAATTCATCACTGTGAGCTCAGATAGGAAGGGTATCTTATATGATGGGAAGACTGGGGATAAACTTGGCGAGTTATCTACAGAGGGTGGCCATAAGGGCAGCACATATGCTGTTAGTTGGAGTCCTGACAGTAAACAGGTGCTTACTGTGTCTGCTGACAAGTCTGCAAAGATCTGGGATATTCATGAGGACGGAAGTGGAAGTTTAAGCAAGAATTTAACGAGTTCTGAATCTGGTGGGGTGGAGGATATGCTTGTTGGTTGTCTTTGGCAGAATGATCATCTTCTTACTGTGTCCCTTGGTGGCATGATCAATTTATATTCTGCAACAGATTTAGATAAAACCCCAGTATCATTATCTGGCCACATGAAAAATGTTGCTGTTTTGACCATGCTCAACAGAAGCGAAAAGATGCTTTTGTCCAGTAGCTATGATGGAGTGATGTTAAGATGGATTATAGGCATTGGTTGTTGTGGTAAATTAGAGAGTAAACAATTTGGATTAATTAAATTGTTAGTAGCTGGTGATGAAGAAGTCATTACAGCTGGATTTGACAACAAGGTTTGGAGGGTTCCTTTACAAGGTGGTAATTTTGGAGCTCCTGAGCAAATTGATGTTGGCAGCCAGCCATATGACTTGAGCCTTGCCCTTAATTCCCCTGAACTTGCTTTGGCAGCAATTGAATCTGGGATTGTTTTGCTTAACCGTTCAAAGATCGTCGCAACTCATAACCTAGGTTTCACTGTGACTGCATCTGCAATTTCACCTGATGGTCGTGAAGCAATTGTAGGTGGGCAAGACGGTAAGTTGCACATATATTCTATCTCAGGAGATACTCTTACAGAAGAGAAAGTCCTTGAAAAGCACCGGGGTGCTCTCAGTGTGATAAGATATTCTCCAGATGTTACCATGTTCGCTTCAGCTGACTTGAACCGTGAAGCTGTCGTTTGGGATCGTGACTCCAAAGAGGTGAAGCTGAATAACATGTTGTTTCACACTGCACGTATTAACTGCCTAGCTTGGTCACCTGATAACACCCTCATAGCTACTGGGTCACTCGATACATGTGTCATTATATATGAAATTGGAAAGCCAGCATCAAGCCGCAGAACCATAAAAGGGGCTCATTTAGGTGGAGTCTACGGGTTGGCTTTTGTTGATAATGATAGCGTGGTTAGTTCTGGAGAAGATGGCTGTATTCGTGTTTGGAATTTGGTTTCAGAATAA 1749 0.4517 MANLSETYACAPSTERGRGILISGDPKSNNILYCTGRSVMIRNLDNPLQVSVYGEHGYPVTVARYSPNGEWIASADISGTWSVDGLRIVACGDGKGKSFVRAFMWDSGSTVGDFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYDGPPFKFNMSIRDHSNFVNCVRFSPDGTKFITVSSDRKGILYDGKTGDKLGELSTEGGHKGSTYAVSWSPDSKQVLTVSADKSAKIWDIHEDGSGSLSKNLTSSESGGVEDMLVGCLWQNDHLLTVSLGGMINLYSATDLDKTPVSLSGHMKNVAVLTMLNRSEKMLLSSSYDGVMLRWIIGIGCCGKLESKQFGLIKLLVAGDEEVITAGFDNKVWRVPLQGGNFGAPEQIDVGSQPYDLSLALNSPELALAAIESGIVLLNRSKIVATHNLGFTVTASAISPDGREAIVGGQDGKLHIYSISGDTLTEEKVLEKHRGALSVIRYSPDVTMFASADLNREAVVWDRDSKEVKLNNMLFHTARINCLAWSPDNTLIATGSLDTCVIIYEIGKPASSRRTIKGAHLGGVYGLAFVDNDSVVSSGEDGCIRVWNLVSE 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0601 582 ProSiteProfiles Trp-Asp (WD) repeats profile. 157 198 IPR001680 GO:0005515
Enph13g0601 582 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 547 582 - -
Enph13g0601 582 ProSiteProfiles Trp-Asp (WD) repeats profile. 503 536 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 46 82 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 286 326 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 150 189 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 107 147 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 539 578 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 410 448 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 453 492 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 497 535 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 240 282 IPR001680 GO:0005515
Enph13g0601 582 SMART WD40_4 192 234 IPR001680 GO:0005515
Enph13g0601 582 ProSitePatterns Trp-Asp (WD) repeats signature. 221 235 IPR019775 -
Enph13g0601 582 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 503 536 - -
Enph13g0601 582 FunFam Actin-interacting protein 1 309 579 - -
Enph13g0601 582 ProSiteProfiles Trp-Asp (WD) repeats profile. 460 501 IPR001680 GO:0005515
Enph13g0601 582 PANTHER WD-REPEATCONTAINING PROTEIN WDR1 80 578 - -
Enph13g0601 582 Gene3D - 290 581 IPR015943 GO:0005515
Enph13g0601 582 Pfam WD domain, G-beta repeat 156 184 IPR001680 GO:0005515
Enph13g0601 582 Pfam WD domain, G-beta repeat 506 534 IPR001680 GO:0005515
Enph13g0601 582 Pfam WD domain, G-beta repeat 549 578 IPR001680 GO:0005515
Enph13g0601 582 Pfam WD domain, G-beta repeat 198 234 IPR001680 GO:0005515
Enph13g0601 582 ProSitePatterns Trp-Asp (WD) repeats signature. 565 579 IPR019775 -
Enph13g0601 582 ProSiteProfiles Trp-Asp (WD) repeats profile. 202 235 IPR001680 GO:0005515
Enph13g0601 582 Gene3D - 10 289 IPR015943 GO:0005515
Enph13g0601 582 SUPERFAMILY WD40 repeat-like 350 580 IPR036322 GO:0005515
Enph13g0601 582 ProSiteProfiles Trp-Asp (WD) repeats profile. 547 582 IPR001680 GO:0005515
Enph13g0601 582 SUPERFAMILY WD40 repeat-like 45 494 IPR036322 GO:0005515
Enph13g0601 582 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 202 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0601 Enph-Chr13 12289556 12292887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0601 157 481 Eukaryotic Initiation Factors Gene Family AT2G46290 22.647 6.08e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0601 K24736 - gmx:100798693 997.653