Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0552 ATGCATAATAAGGATGCTTGCTCTTCCTCCTCCAATGGCGGAGTTGGTACCAGCATCACTACTACTGGTCAGATGCAGTCGAATGGCGCCATCTATGGTGCCATCTACTCTACTCTGTTTTCTGACAAGCCGTCCCTCTCTGCAACCGATAACGGCGATCTCTCGGTTCACCCGTATGAAGGAAACCCTCCCTTGAAGTACAATGACTCGCCGATTCAGAGTCACCTTTACGACTCCTGTGTCATACAGAATCATCAAGATATGGTGAACCGCCATAGTATGTGCCTAAATCGCCTCGCCGAAACTTCGAAGGAGGTCGACGCTCTGCGGCAGGAGAACACCCAACTTCGGGCTGTTAATAGGGAGCTGAACAACCAATTGAGCCTCCTCATTCAGGTTTCGGTCCAGAATCAATTGGATGGCTCCTCTGGTCATACAGAAGCGTTTGATGTCATAAATGGGTTTCGTGGCTTACGTATTGGGGACAATTTCGGGGATGGGAAAGAGAACTGCGATAATTGGAATAAGGATCAAGAGGTTTCGGACGAGAGTCCAACAAGCGTGATTGAGAACACTGCTGAAGTGGAAAGGTTCTCGCTGCCCAAGAGTATTTCTGTAAGATCAAATGGGTACTTGAAGGTTGCCCAGACTGCGGCCGGTGCCAGCAATGGAAATCGTACCAAGGGTGCTACTCGGCCACGCACCTCCTTGACTCCACCTGATGTCGTTCAAAAGGTGTATGTTCGTGGAGGTAAGAAGGAGGAAGAGCCTCTTGAGATGGTGGTGTATAACCAAGGCATGTTCAAGACTGAGCTGTGCAACAAATGGCAGGAGACCGGTACATGCCCATATAAGGATCAATGCCAATTTGCTCACGGTATTGGTGAGCTCCGCCCAGTCATCCGCCATCCACGCTACAAGACTGAGGTCTGCAGGATGGTCCTTGCTGGCGTCGTATGCCCATATGGCCATAGATGCCATTTCCGCCATGCACTCACTGAACAAGAGAAAGCCATAGCGCAGCCTAAGCCCAGGCCAATGAACCTGCACAGATAA 1056 0.5038 MHNKDACSSSSNGGVGTSITTTGQMQSNGAIYGAIYSTLFSDKPSLSATDNGDLSVHPYEGNPPLKYNDSPIQSHLYDSCVIQNHQDMVNRHSMCLNRLAETSKEVDALRQENTQLRAVNRELNNQLSLLIQVSVQNQLDGSSGHTEAFDVINGFRGLRIGDNFGDGKENCDNWNKDQEVSDESPTSVIENTAEVERFSLPKSISVRSNGYLKVAQTAAGASNGNRTKGATRPRTSLTPPDVVQKVYVRGGKKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYKDQCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAIAQPKPRPMNLHR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0552 351 SUPERFAMILY CCCH zinc finger 301 335 IPR036855 GO:0046872
Enph13g0552 351 MobiDBLite consensus disorder prediction 1 22 - -
Enph13g0552 351 MobiDBLite consensus disorder prediction 217 238 - -
Enph13g0552 351 Coils Coil 99 126 - -
Enph13g0552 351 SMART c3hfinal6 267 294 IPR000571 GO:0046872
Enph13g0552 351 SMART c3hfinal6 305 332 IPR000571 GO:0046872
Enph13g0552 351 FunFam Zinc finger protein 36, C3H1 type-like 1 301 337 - -
Enph13g0552 351 SUPERFAMILY CCCH zinc finger 264 299 IPR036855 GO:0046872
Enph13g0552 351 ProSiteProfiles Zinc finger C3H1-type profile. 267 295 IPR000571 GO:0046872
Enph13g0552 351 FunFam zinc finger CCCH domain-containing protein 15-like 261 300 - -
Enph13g0552 351 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 268 293 IPR000571 GO:0046872
Enph13g0552 351 PANTHER CCCH ZINC FINGER/TIS11-RELATED 85 339 IPR045877 GO:0003729
Enph13g0552 351 Gene3D - 262 300 - -
Enph13g0552 351 Gene3D - 301 337 - -
Enph13g0552 351 ProSiteProfiles Zinc finger C3H1-type profile. 305 333 IPR000571 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0552 75 340 C3H Transcription Factor Family AT1G68200 55.072 1.48e-88 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Enph13g0552 zf-CCCH 4.7e-10 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0552 K18753 - qsa:O6P43_025764 442.195