Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0394 ATGGGTAGAGGAAGAGTGGAGCTGAAGAGGATCGAGAACAAGATAAATCGGCAAGTGACATTTGCCAAGAGGAGGAATGGGCTTCTCAAGAAGGCTTACGAGCTATCAGTCCTCTGCGATGCTGAGGTTGCTCTTATCATCTTCTCCAATCGAGGCAAGCTCTATGAGTTCTGCAGCTCTAGCATGGCCAAGACCATTGAACGGTACCAAAGGTGCAGCTATGGAGCCTTGGAAACAGAACAGCCTGCAATGGAGACACAGAGGTGCTATCAAGAGTATCTCAAGCTGAAATCAAAAGTCGAGGCACTACAGCGCACACAGAGAAATCTGCTTGGGGAGGAATTGGAGCATTTGGGCATAAAGGATCTTGAGCAGCTTGAACGTCAGCTGGACTCTTCACTGAAGCAAATTAGGTCGAACAAGACACAACATTTGCTTGATCAGCTTTCTGATCTACAAAGGAAGGAAGAGATGCTTCTGGAAACTAACAGCGTCTTGAGGAGCAAGTTGGACGAAATAAACATAACCCTTCAACCATCATGGGAAGCTAGGGAGGGAAATGATTCATACAGTCGCCACCCTCCACACTCCGAGCCATTCTTTGGGATTGCACAATGCAGTCGTACATTGCACATGGGCTTTGGTTCTGCAGAAACAAATGAAGCTGGAGCAGCCGTAGGAACCTCTGCCCAAAATGCTAGTATGTTCATGCCAGGATGGATGGCTTGA 729 0.476 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSMAKTIERYQRCSYGALETEQPAMETQRCYQEYLKLKSKVEALQRTQRNLLGEELEHLGIKDLEQLERQLDSSLKQIRSNKTQHLLDQLSDLQRKEEMLLETNSVLRSKLDEINITLQPSWEAREGNDSYSRHPPHSEPFFGIAQCSRTLHMGFGSAETNEAGAAVGTSAQNASMFMPGWMA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0394 242 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Enph13g0394 242 Gene3D - 13 82 IPR036879 GO:0003677|GO:0046983
Enph13g0394 242 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Enph13g0394 242 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Enph13g0394 242 Coils Coil 120 143 - -
Enph13g0394 242 Pfam K-box region 84 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Enph13g0394 242 SUPERFAMILY SRF-like 2 82 IPR036879 GO:0003677|GO:0046983
Enph13g0394 242 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Enph13g0394 242 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Enph13g0394 242 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Enph13g0394 242 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Enph13g0394 242 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Enph13g0394 242 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 164 - -
Enph13g0394 242 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Enph13g0394 242 FunFam MADS-box transcription factor 1 13 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0394 Enph-Chr13 10013294 10026670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0394 1 241 MADS-box Gene Family AT5G15800 59.387 3.35e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Enph13g0394 K-box 5.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0394 K09264 - gmx:100811049 374.015