Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0184 ATGGAGGAAATGTACGGACTCCCGTCGTCTCCCGCGGATTACTCTGACAAAGCCCTTATGACGCCGGAGAATCTGATCTTCCCAGCTGACTATCAGAGCTTCCTCATGTCTTCTTCCGCCGCCCCTGCCATCCGTGATCGGATTCCCATTTTTGGATCCGACGAGTTGCTTTCCGCTGCCTCCGCGATTACCGAAGTCGAAGCCTCCGTCGCTGCGCCTGGATTTCGTCAACAAGAGGACACTTCCTCCGTCATCAAAGCCAGAATCGCATCACATCCTCACTATCCTCGTCTTGTTCAAGCTTATATCGATTGCCAGAAGGTTGGAGCGCCTTCAGAAATTGCGTGTTTGTTAGATGAAATCCGGCGAGAAAACGACCTTTGCAAGAGGGACGAAACCTACTGCGACGTGCTGTCGAGGTATAAATCTGATCTTGCTCGGCCTTTTGATGAAGCTACCTCCTTCCTCAACAAGATCGGAACCCAGCTCAGCAATCTCTGCAGTGGTGCTTTAGTTCTAAGCCTTTCCGATGATGGGGGTATGTCTTCAGAAGAAGATTTCAGTACCGAAGGTGGAGACACTCAAGATGGTCAAGCGAAAGGAGAAGACCAAGAGCTTAAGGATAAGCTTCTTCGCAAGTTTGGAGGTCGCATTGGTTCTTTAAAGTTGGAGTTCTCAAAGAAGAAAAAGAAAGGTAAGCTGCCAAAAGAAGCCAGGCAATCACTGCTTGAGTGGTGGGGTGTTCACTATAAATGGCCATACCCAACGGAATCTGACAAGATTGCACTGGCCAAGTCCACGGGTCTAGACCAGAAGCAAATTAGTAATTGGTTTATTAATCAGAGAAAGCGCCACTGGAAGCCTTCTGAGAACATCAATATGCAATTTTCTGCCATGGATGATCTTGCTGGAAGGTTTTTTACCGATGAATGA 933 0.4812 MEEMYGLPSSPADYSDKALMTPENLIFPADYQSFLMSSSAAPAIRDRIPIFGSDELLSAASAITEVEASVAAPGFRQQEDTSSVIKARIASHPHYPRLVQAYIDCQKVGAPSEIACLLDEIRRENDLCKRDETYCDVLSRYKSDLARPFDEATSFLNKIGTQLSNLCSGALVLSLSDDGGMSSEEDFSTEGGDTQDGQAKGEDQELKDKLLRKFGGRIGSLKLEFSKKKKKGKLPKEARQSLLEWWGVHYKWPYPTESDKIALAKSTGLDQKQISNWFINQRKRHWKPSENINMQFSAMDDLAGRFFTDE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0184 310 SUPERFAMILY Homeodomain-like 226 295 IPR009057 -
Enph13g0184 310 SMART HOX_1 227 292 IPR001356 GO:0003677
Enph13g0184 310 Pfam KNOX1 domain 85 126 IPR005540 GO:0003677|GO:0005634
Enph13g0184 310 ProSitePatterns 'Homeobox' domain signature. 263 286 IPR017970 GO:0000981|GO:0006355
Enph13g0184 310 Pfam KNOX2 domain 132 167 IPR005541 GO:0003677|GO:0005634
Enph13g0184 310 Gene3D - 224 297 - -
Enph13g0184 310 Pfam ELK domain 205 226 IPR005539 GO:0003677
Enph13g0184 310 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 86 296 - -
Enph13g0184 310 Pfam Homeobox KN domain 245 284 IPR008422 GO:0003677|GO:0006355
Enph13g0184 310 ProSiteProfiles 'Homeobox' domain profile. 225 288 IPR001356 GO:0003677
Enph13g0184 310 SMART ELK_2 205 226 IPR005539 GO:0003677
Enph13g0184 310 MobiDBLite consensus disorder prediction 181 203 - -
Enph13g0184 310 ProSiteProfiles ELK domain profile. 205 225 IPR005539 GO:0003677
Enph13g0184 310 SMART KNOX2_2 125 168 IPR005541 GO:0003677|GO:0005634
Enph13g0184 310 CDD homeodomain 251 289 IPR001356 GO:0003677
Enph13g0184 310 SMART KNOX1_2 83 127 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0184 Enph-Chr13 7648495 7664306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0184 1 310 Homeobox Transcription Factor Family AT1G23380 59.644 1.16e-127 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Enph13g0184 KNOX1 1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0184 - - gmx:100803730 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g0184 13 7648495 7664306 Enph14g0621 14 8257968 8260644 CCT
Enph13g0184 13 7648495 7664306 Enph13g0184 13 7648495 7664306 ECH