Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0089 ATGGATGAGCATCTCGTTGACGAAGACTTTCCACTCTTCTCCAAATCTCATAAACCCTCAAAAAACCGCTCGCCGACCGCCGCAACCGCTGCAACCAGTGCTTCCACCTCCACCGCCGTCACAGACATCAACATTGATAACCAACACCTTGGAAAATCAGATGACACCCATCCTGATTTCACCAATCCTTCAACTTTCGCAAACCTTGGACTTGCCGAATGGGCCGTGAAGACTTGTAAAGAGCTCAAGATGCTCAAGCCTCGGCGAGTCCAATCGCATTGCATCCCGAAGATTCTGGATGGCCGTCATGTGCTTGGCATTGATGAGACGGGAAGCGGTAAGACTGCGGCATTTGCTCTCCCAATTCTTCACCGCTTGGGTGAGCATCCTTTTGGGGTTTTCGCCTTGGTTTTGACACCAACGAGGGAGTTGGCGTACCAACTGGCGGAGCAATTTAGGGCTTTGGGTTCGTGCTTGCATGTGCGGATAGCCGTGGTGGTTGGAGGGATGGATATGTTGACACAAGCCAAGACTTTGACATCCAGGCCGCATATTGTGATTGCCACACCAGGAAGGATCAAGGTTTTACTCGAGGATAGTCCTGATATTTCTCCAGTTTTCTCTAGAACAAAGTTCCTTGTCTTGGATGAAGCAGATCGAGTTCTTGATGTTGGCTTTCAGGACGATTTGAAGTTGATCTTTAAGTGTTTGCCAGAAAATCGGCAAAACCTATTCTTTTCTGCTACTACGACAAGTAATCTGAAGAAGTTGTGTGAGCGTTATCAAGATAAGCTTTATGTCTATGAGGCCTATGAAGGCCTGAAAACAGTTGAGACACTTAAGCAACAGATTGTATTTGTCCCCAAGAAAGTGAAGGAGGTTTATTTAATGCATATATTGTCCAAAATGGAAGATATGGGCATTCGCTCTGCCATTGTTTTTTTCTCTACCTGCAGAGATTGTCATCGGTTAAGTTTAATGCTGGAAGTACTTGATCAAGAAGCTACCGCTCTCTATTCGTTCAAATCACAAACTCAGAGACTTGAAGCTCTTCATCAATTTAAATCAGGAATGGTTTCTATACTGCTTGCAACTGATGTTGCCAGCCGAGGTTTGGACATTCCTACAGTTGATCTAGTTATCAATTATGATGTTCCAAGGATTCCGAGGGATTATGTTCATCGTGTTGGTCGAACTGCAAGAGCTGGTAGAGGAGGATTGGCAGTAAGCATTGTCACTCAGAATGACATTCATCTCATTCATGCAGTAGAAGCTCTTCTTGGAAGGCAACTTGAGTTGCTTGAATACAAAGACAATGAGGTGCTTCCTCAGTTGAAAAAGGTCTTCAGTGCTAAAAATGTGGCAGAAATGAAAATGTTGGATGATGGATTTGAGGAGAAAGCAGAAGAGCGGAAAAGGCAGAAACTGAAAATGTTAGCAGAAAAAGGATTATTAAAGAAAAGGAGCAAAAAGAGAAAAAGAAATAAAGGACTCAAGGAAGAAGGAAAAAAACATAAAAAGGCAGTGGAGAAGTTATCGGATAAAGGTTCAGAGAATAAAATGAGTAACAAGAGGATGTGA 1581 0.4345 MDEHLVDEDFPLFSKSHKPSKNRSPTAATAATSASTSTAVTDINIDNQHLGKSDDTHPDFTNPSTFANLGLAEWAVKTCKELKMLKPRRVQSHCIPKILDGRHVLGIDETGSGKTAAFALPILHRLGEHPFGVFALVLTPTRELAYQLAEQFRALGSCLHVRIAVVVGGMDMLTQAKTLTSRPHIVIATPGRIKVLLEDSPDISPVFSRTKFLVLDEADRVLDVGFQDDLKLIFKCLPENRQNLFFSATTTSNLKKLCERYQDKLYVYEAYEGLKTVETLKQQIVFVPKKVKEVYLMHILSKMEDMGIRSAIVFFSTCRDCHRLSLMLEVLDQEATALYSFKSQTQRLEALHQFKSGMVSILLATDVASRGLDIPTVDLVINYDVPRIPRDYVHRVGRTARAGRGGLAVSIVTQNDIHLIHAVEALLGRQLELLEYKDNEVLPQLKKVFSAKNVAEMKMLDDGFEEKAEERKRQKLKMLAEKGLLKKRSKKRKRNKGLKEEGKKHKKAVEKLSDKGSENKMSNKRM 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0089 526 Coils Coil 495 515 - -
Enph13g0089 526 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 95 268 IPR014001 -
Enph13g0089 526 MobiDBLite consensus disorder prediction 17 38 - -
Enph13g0089 526 CDD DEADc_DDX49 66 269 - -
Enph13g0089 526 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 22 518 - -
Enph13g0089 526 SMART ultradead3 83 283 IPR014001 -
Enph13g0089 526 MobiDBLite consensus disorder prediction 484 501 - -
Enph13g0089 526 Pfam Helicase conserved C-terminal domain 308 403 IPR001650 -
Enph13g0089 526 Gene3D - 25 268 IPR027417 -
Enph13g0089 526 Gene3D - 275 525 IPR027417 -
Enph13g0089 526 MobiDBLite consensus disorder prediction 477 526 - -
Enph13g0089 526 Pfam DEAD/DEAH box helicase 89 257 IPR011545 GO:0003676|GO:0005524
Enph13g0089 526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 422 IPR027417 -
Enph13g0089 526 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 214 222 IPR000629 -
Enph13g0089 526 SMART helicmild6 322 403 IPR001650 -
Enph13g0089 526 MobiDBLite consensus disorder prediction 1 38 - -
Enph13g0089 526 MobiDBLite consensus disorder prediction 1 16 - -
Enph13g0089 526 CDD SF2_C_DEAD 280 412 - -
Enph13g0089 526 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 279 442 IPR001650 -
Enph13g0089 526 MobiDBLite consensus disorder prediction 502 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0089 Enph-Chr13 5666857 5673984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph13g0089 47 416 Eukaryotic Initiation Factors Gene Family AT3G13920 32.432 8.01e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0089 K14778 - gmx:100804060 706.057